RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MVPQ14764 893 aaKnown RBP16.78■□□□□ 0.28
SCAF4-201ENST00000286835 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
SCAF4-201ENST00000286835 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
SCAF4-201ENST00000286835 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
SCAF4-201ENST00000286835 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
SCAF4-201ENST00000286835 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.27
SCAF4-201ENST00000286835 MAGI2Q86UL8 1455 aa16.77■□□□□ 0.27
SCAF4-201ENST00000286835 RIPK4P57078 832 aa16.77■□□□□ 0.27
SCAF4-201ENST00000286835 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.27
SCAF4-201ENST00000286835 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
SCAF4-201ENST00000286835 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
SCAF4-201ENST00000286835 RRAGDQ9NQL2 400 aaPredicted RBP16.76■□□□□ 0.27
SCAF4-201ENST00000286835 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
SCAF4-201ENST00000286835 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-201ENST00000286835 XRCC6P12956 609 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCAF4-201ENST00000286835 FOXD4L5Q5VV16 416 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-201ENST00000286835 FOXD4L4Q8WXT5 416 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-201ENST00000286835 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
SCAF4-201ENST00000286835 ADGBQ8N7X0 1667 aa16.75■□□□□ 0.27
SCAF4-201ENST00000286835 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCAF4-201ENST00000286835 SYCP2Q9BX26 1530 aa16.74■□□□□ 0.27
SCAF4-201ENST00000286835 NUP160Q12769 1436 aa16.74■□□□□ 0.27
SCAF4-201ENST00000286835 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
SCAF4-201ENST00000286835 POLR1AO95602 1720 aaPredicted RBP16.74■□□□□ 0.27
SCAF4-201ENST00000286835 ZNF521Q96K83 1311 aa16.74■□□□□ 0.27
SCAF4-201ENST00000286835 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
SCAF4-201ENST00000286835 DDX49Q9Y6V7 483 aaKnown RBP16.73■□□□□ 0.27
SCAF4-201ENST00000286835 MRE11P49959 708 aa16.72■□□□□ 0.27
SCAF4-201ENST00000286835 ASXL1Q8IXJ9 1541 aa16.72■□□□□ 0.27
SCAF4-201ENST00000286835 SCAF11Q99590 1463 aaKnown RBP16.72■□□□□ 0.27
SCAF4-201ENST00000286835 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
SCAF4-201ENST00000286835 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
SCAF4-201ENST00000286835 WDR63Q8IWG1 891 aa16.71■□□□□ 0.27
SCAF4-201ENST00000286835 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
SCAF4-201ENST00000286835 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
SCAF4-201ENST00000286835 SHANK2Q9UPX8 1470 aa16.7■□□□□ 0.26
SCAF4-201ENST00000286835 A0A0G2JS52 829 aa16.7■□□□□ 0.26
SCAF4-201ENST00000286835 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
SCAF4-201ENST00000286835 HMOX1P09601 288 aa16.69■□□□□ 0.26
SCAF4-201ENST00000286835 TRIM27P14373 513 aa16.69■□□□□ 0.26
SCAF4-201ENST00000286835 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
SCAF4-201ENST00000286835 ATF7IPQ6VMQ6 1270 aa16.69■□□□□ 0.26
SCAF4-201ENST00000286835 USP19O94966 1318 aa16.69■□□□□ 0.26
SCAF4-201ENST00000286835 PLA2R1Q13018 1463 aa16.68■□□□□ 0.26
SCAF4-201ENST00000286835 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
SCAF4-201ENST00000286835 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
SCAF4-201ENST00000286835 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
SCAF4-201ENST00000286835 KDM5DQ9BY66 1539 aa16.68■□□□□ 0.26
SCAF4-201ENST00000286835 NINLQ9Y2I6 1382 aa16.67■□□□□ 0.26
SCAF4-201ENST00000286835 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
SCAF4-201ENST00000286835 FOXD4L6Q3SYB3 417 aaPredicted RBP16.67■□□□□ 0.26
SCAF4-201ENST00000286835 FOXD4L3Q6VB84 417 aaPredicted RBP16.67■□□□□ 0.26
SCAF4-201ENST00000286835 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
SCAF4-201ENST00000286835 TRMT2AQ8IZ69 625 aaKnown RBP16.66■□□□□ 0.26
SCAF4-201ENST00000286835 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
SCAF4-201ENST00000286835 PIK3C2GO75747 1445 aa16.66■□□□□ 0.26
SCAF4-201ENST00000286835 AAMPQ13685 434 aa16.66■□□□□ 0.26
SCAF4-201ENST00000286835 FANCAO15360 1455 aa16.65■□□□□ 0.26
SCAF4-201ENST00000286835 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
SCAF4-201ENST00000286835 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
SCAF4-201ENST00000286835 WDR7Q9Y4E6 1490 aa16.65■□□□□ 0.26
SCAF4-201ENST00000286835 ESPNB1AK53 854 aa16.64■□□□□ 0.25
SCAF4-201ENST00000286835 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
SCAF4-201ENST00000286835 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
SCAF4-201ENST00000286835 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
SCAF4-201ENST00000286835 ABCC10Q5T3U5 1492 aa16.64■□□□□ 0.25
SCAF4-201ENST00000286835 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
SCAF4-201ENST00000286835 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.25
SCAF4-201ENST00000286835 DNTTIP2Q5QJE6 756 aaKnown RBP16.64■□□□□ 0.25
SCAF4-201ENST00000286835 MCTP1Q6DN14 999 aa16.63■□□□□ 0.25
SCAF4-201ENST00000286835 TNPO1Q92973 898 aaKnown RBP16.63■□□□□ 0.25
SCAF4-201ENST00000286835 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
SCAF4-201ENST00000286835 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
SCAF4-201ENST00000286835 FBLN1P23142 703 aa16.62■□□□□ 0.25
SCAF4-201ENST00000286835 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
SCAF4-201ENST00000286835 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
SCAF4-201ENST00000286835 INSRP06213 1382 aa16.61■□□□□ 0.25
SCAF4-201ENST00000286835 NGDNQ8NEJ9 315 aaKnown RBP16.61■□□□□ 0.25
SCAF4-201ENST00000286835 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
SCAF4-201ENST00000286835 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
SCAF4-201ENST00000286835 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
SCAF4-201ENST00000286835 PRKAR2BP31323 418 aa16.6■□□□□ 0.25
SCAF4-201ENST00000286835 FBXO31Q5XUX0 539 aaPredicted RBP16.59■□□□□ 0.25
SCAF4-201ENST00000286835 TRAPPC8Q9Y2L5 1435 aa16.59■□□□□ 0.25
SCAF4-201ENST00000286835 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
SCAF4-201ENST00000286835 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
SCAF4-201ENST00000286835 TRPM1Q7Z4N2 1603 aa16.59■□□□□ 0.25
SCAF4-201ENST00000286835 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
SCAF4-201ENST00000286835 PLCH2O75038 1416 aa16.58■□□□□ 0.25
SCAF4-201ENST00000286835 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.24
SCAF4-201ENST00000286835 SSFA2P28290 1259 aa16.58■□□□□ 0.24
SCAF4-201ENST00000286835 EIF2AK4Q9P2K8 1649 aaKnown RBP16.58■□□□□ 0.24
SCAF4-201ENST00000286835 PRDM15P57071 1507 aaPredicted RBP16.57■□□□□ 0.24
SCAF4-201ENST00000286835 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
SCAF4-201ENST00000286835 POLR3AO14802 1390 aaPredicted RBP16.56■□□□□ 0.24
SCAF4-201ENST00000286835 RBM10P98175 930 aaKnown RBP16.56■□□□□ 0.24
SCAF4-201ENST00000286835 FAM13BQ9NYF5 915 aa16.56■□□□□ 0.24
SCAF4-201ENST00000286835 K7ELQ4 463 aaPredicted RBP16.56■□□□□ 0.24
SCAF4-201ENST00000286835 NOS1P29475 1434 aa16.55■□□□□ 0.24
SCAF4-201ENST00000286835 RNF214Q8ND24 703 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms