RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
SEC16A-201ENST00000277537 THEMISQ8N1K5 641 aaPredicted RBP11.54□□□□□ -0.56
SEC16A-201ENST00000277537 PTPRTO14522 1441 aa11.54□□□□□ -0.56
SEC16A-201ENST00000277537 MLH3Q9UHC1 1453 aa11.54□□□□□ -0.56
SEC16A-201ENST00000277537 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
SEC16A-201ENST00000277537 IQGAP3Q86VI3 1631 aa11.54□□□□□ -0.56
SEC16A-201ENST00000277537 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
SEC16A-201ENST00000277537 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
SEC16A-201ENST00000277537 NCKAP5LQ9HCH0 1330 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 PRKAR2BP31323 418 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 NME9Q86XW9 330 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 C20orf194Q5TEA3 1177 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 ZMYM3Q14202 1370 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 TRPM2O94759 1503 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 UNC13BO14795 1591 aa11.53□□□□□ -0.56
SEC16A-201ENST00000277537 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
SEC16A-201ENST00000277537 ABCA9Q8IUA7 1624 aa11.52□□□□□ -0.56
SEC16A-201ENST00000277537 WWC1Q8IX03 1113 aa11.52□□□□□ -0.56
SEC16A-201ENST00000277537 ARAP3Q8WWN8 1544 aa11.52□□□□□ -0.57
SEC16A-201ENST00000277537 WASLO00401 505 aaPredicted RBP11.51□□□□□ -0.57
SEC16A-201ENST00000277537 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
SEC16A-201ENST00000277537 HAP1P54257 671 aaPredicted RBP11.51□□□□□ -0.57
SEC16A-201ENST00000277537 FYB1O15117 783 aa11.51□□□□□ -0.57
SEC16A-201ENST00000277537 NLRP6P59044 892 aa11.51□□□□□ -0.57
SEC16A-201ENST00000277537 SLFN5Q08AF3 891 aa11.51□□□□□ -0.57
SEC16A-201ENST00000277537 SKAP1Q86WV1 359 aa11.51□□□□□ -0.57
SEC16A-201ENST00000277537 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
SEC16A-201ENST00000277537 MAGI2Q86UL8 1455 aa11.5□□□□□ -0.57
SEC16A-201ENST00000277537 TNRQ92752 1358 aa11.5□□□□□ -0.57
SEC16A-201ENST00000277537 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
SEC16A-201ENST00000277537 EMILIN1Q9Y6C2 1016 aa11.5□□□□□ -0.57
SEC16A-201ENST00000277537 RIMS2Q9UQ26 1411 aa11.5□□□□□ -0.57
SEC16A-201ENST00000277537 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
SEC16A-201ENST00000277537 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
SEC16A-201ENST00000277537 CLTCL1P53675 1640 aa11.49□□□□□ -0.57
SEC16A-201ENST00000277537 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
SEC16A-201ENST00000277537 HECW2Q9P2P5 1572 aa11.49□□□□□ -0.57
SEC16A-201ENST00000277537 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
SEC16A-201ENST00000277537 MS4A1P11836 297 aa11.48□□□□□ -0.57
SEC16A-201ENST00000277537 THUMPD2Q9BTF0 503 aaKnown RBP11.48□□□□□ -0.57
SEC16A-201ENST00000277537 IPO8O15397 1037 aaKnown RBP11.48□□□□□ -0.57
SEC16A-201ENST00000277537 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
SEC16A-201ENST00000277537 PSME1Q06323 249 aa11.48□□□□□ -0.57
SEC16A-201ENST00000277537 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
SEC16A-201ENST00000277537 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
SEC16A-201ENST00000277537 E9PCH4 1651 aa11.47□□□□□ -0.57
SEC16A-201ENST00000277537 APBB1O00213 710 aa11.47□□□□□ -0.57
SEC16A-201ENST00000277537 PLEKHH1Q9ULM0 1364 aa11.47□□□□□ -0.57
SEC16A-201ENST00000277537 ZKSCAN2Q63HK3 967 aa11.47□□□□□ -0.57
SEC16A-201ENST00000277537 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
SEC16A-201ENST00000277537 TET3O43151 1660 aa11.47□□□□□ -0.57
SEC16A-201ENST00000277537 A0A0G2JS52 829 aa11.46□□□□□ -0.57
SEC16A-201ENST00000277537 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.57
SEC16A-201ENST00000277537 ABTB2Q8N961 1025 aa11.46□□□□□ -0.57
SEC16A-201ENST00000277537 ANKRD36BQ8N2N9 1353 aa11.46□□□□□ -0.57
SEC16A-201ENST00000277537 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
SEC16A-201ENST00000277537 EFCAB6Q5THR3 1501 aa11.46□□□□□ -0.58
SEC16A-201ENST00000277537 A0A1W2PP64 1363 aa11.46□□□□□ -0.58
SEC16A-201ENST00000277537 TMPOP42166 694 aaKnown RBP11.46□□□□□ -0.58
SEC16A-201ENST00000277537 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.58
SEC16A-201ENST00000277537 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.58
SEC16A-201ENST00000277537 CFAP74Q9C0B2 1584 aa11.45□□□□□ -0.58
SEC16A-201ENST00000277537 XPCQ01831 940 aaPredicted RBP11.45□□□□□ -0.58
SEC16A-201ENST00000277537 PDE4AP27815 886 aa11.45□□□□□ -0.58
SEC16A-201ENST00000277537 ANKLE2Q86XL3 938 aa11.45□□□□□ -0.58
SEC16A-201ENST00000277537 ABCC3O15438 1527 aa11.45□□□□□ -0.58
SEC16A-201ENST00000277537 TRPM1Q7Z4N2 1603 aa11.45□□□□□ -0.58
SEC16A-201ENST00000277537 CENPQQ7L2Z9 268 aaPredicted RBP11.44□□□□□ -0.58
SEC16A-201ENST00000277537 LMOD3Q0VAK6 560 aa11.44□□□□□ -0.58
SEC16A-201ENST00000277537 RWDD1Q9H446 243 aaPredicted RBP11.44□□□□□ -0.58
SEC16A-201ENST00000277537 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
SEC16A-201ENST00000277537 ERVK-7P63135 1459 aa11.44□□□□□ -0.58
SEC16A-201ENST00000277537 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
SEC16A-201ENST00000277537 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
SEC16A-201ENST00000277537 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
SEC16A-201ENST00000277537 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
SEC16A-201ENST00000277537 DEKP35659 375 aaKnown RBP11.43□□□□□ -0.58
SEC16A-201ENST00000277537 DCTN1Q14203 1278 aa11.43□□□□□ -0.58
SEC16A-201ENST00000277537 CSB-PGBD3P0DP91 1061 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 SPHKAPQ2M3C7 1700 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 LTKP29376 864 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 WDR63Q8IWG1 891 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 INO80Q9ULG1 1556 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-201ENST00000277537 PIK3C2GO75747 1445 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 KIDINS220Q9ULH0 1771 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 ACEP12821 1306 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 RNF17Q9BXT8 1623 aaKnown RBP11.42□□□□□ -0.58
SEC16A-201ENST00000277537 KIF1BO60333 1816 aa11.42□□□□□ -0.58
SEC16A-201ENST00000277537 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-201ENST00000277537 CEP152O94986 1710 aa11.41□□□□□ -0.58
SEC16A-201ENST00000277537 MYOM2P54296 1465 aa11.41□□□□□ -0.58
SEC16A-201ENST00000277537 FCHSD2O94868 740 aa11.41□□□□□ -0.58
SEC16A-201ENST00000277537 HSP90AA1P07900 732 aaKnown RBP11.4□□□□□ -0.58
SEC16A-201ENST00000277537 POLKQ9UBT6 870 aa11.4□□□□□ -0.58
SEC16A-201ENST00000277537 GNAI1P63096 354 aa11.4□□□□□ -0.59
SEC16A-201ENST00000277537 PPIP5K1Q6PFW1 1433 aa11.39□□□□□ -0.59
SEC16A-201ENST00000277537 POLR3AO14802 1390 aaPredicted RBP11.39□□□□□ -0.59
SEC16A-201ENST00000277537 ARXQ96QS3 562 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms