RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 DHX57Q6P158 1386 aaKnown RBP30.85■■■□□ 2.53
HCFC1R1-201ENST00000248089 DDX17Q92841 729 aaKnown RBP30.82■■■□□ 2.52
HCFC1R1-201ENST00000248089 FMN2Q9NZ56 1722 aa30.8■■■□□ 2.52
HCFC1R1-201ENST00000248089 ADGRB1O14514 1584 aa30.79■■■□□ 2.52
HCFC1R1-201ENST00000248089 ORAI2Q96SN7 254 aa30.78■■■□□ 2.52
HCFC1R1-201ENST00000248089 LRP6O75581 1613 aa30.76■■■□□ 2.52
HCFC1R1-201ENST00000248089 SPATA31A6Q5VVP1 1343 aa30.75■■■□□ 2.51
HCFC1R1-201ENST00000248089 DLC1Q96QB1 1528 aa30.75■■■□□ 2.51
HCFC1R1-201ENST00000248089 NUTM2FA1L443 756 aa30.74■■■□□ 2.51
HCFC1R1-201ENST00000248089 STAC3Q96MF2 364 aa30.74■■■□□ 2.51
HCFC1R1-201ENST00000248089 SOCS7O14512 581 aa30.73■■■□□ 2.51
HCFC1R1-201ENST00000248089 SAFB2Q14151 953 aaKnown RBP eCLIP30.73■■■□□ 2.51
HCFC1R1-201ENST00000248089 PRAM1Q96QH2 718 aa30.73■■■□□ 2.51
HCFC1R1-201ENST00000248089 ESCO1Q5FWF5 840 aa30.72■■■□□ 2.51
HCFC1R1-201ENST00000248089 SIRT1Q96EB6 747 aa30.72■■■□□ 2.51
HCFC1R1-201ENST00000248089 RGS17Q9UGC6 210 aaPredicted RBP30.72■■■□□ 2.51
HCFC1R1-201ENST00000248089 LRRC59Q96AG4 307 aaKnown RBP30.71■■■□□ 2.51
HCFC1R1-201ENST00000248089 RGPD8O14715 1765 aaPredicted RBP30.71■■■□□ 2.51
HCFC1R1-201ENST00000248089 MEX3CQ5U5Q3 659 aaKnown RBP30.7■■■□□ 2.51
HCFC1R1-201ENST00000248089 POGKQ9P215 609 aa30.69■■■□□ 2.5
HCFC1R1-201ENST00000248089 TRAK1Q9UPV9 953 aa30.69■■■□□ 2.5
HCFC1R1-201ENST00000248089 NUTM2BA6NNL0 878 aaPredicted RBP30.68■■■□□ 2.5
HCFC1R1-201ENST00000248089 NUTM2EB1AL46 878 aaPredicted RBP30.68■■■□□ 2.5
HCFC1R1-201ENST00000248089 NUTM2AQ8IVF1 878 aaPredicted RBP30.68■■■□□ 2.5
HCFC1R1-201ENST00000248089 ARHGEF28Q8N1W1 1705 aaKnown RBP30.67■■■□□ 2.5
HCFC1R1-201ENST00000248089 KIAA1210Q9ULL0 1709 aa30.67■■■□□ 2.5
HCFC1R1-201ENST00000248089 KIF1AQ12756 1690 aa30.66■■■□□ 2.5
HCFC1R1-201ENST00000248089 PNPLA6Q8IY17 1366 aa30.66■■■□□ 2.5
HCFC1R1-201ENST00000248089 ADGRB2O60241 1585 aa30.65■■■□□ 2.5
HCFC1R1-201ENST00000248089 SOS2Q07890 1332 aaPredicted RBP30.64■■■□□ 2.5
HCFC1R1-201ENST00000248089 NPHP3Q7Z494 1330 aa30.62■■■□□ 2.49
HCFC1R1-201ENST00000248089 PXDNQ92626 1479 aa30.6■■■□□ 2.49
HCFC1R1-201ENST00000248089 FOXO3O43524 673 aa30.59■■■□□ 2.49
HCFC1R1-201ENST00000248089 XPCQ01831 940 aaPredicted RBP30.59■■■□□ 2.49
HCFC1R1-201ENST00000248089 POTEAQ6S8J7 498 aa30.59■■■□□ 2.49
HCFC1R1-201ENST00000248089 SIN3AQ96ST3 1273 aa30.59■■■□□ 2.49
HCFC1R1-201ENST00000248089 TRIM26Q12899 539 aaPredicted RBP30.58■■■□□ 2.49
HCFC1R1-201ENST00000248089 HIRIP3Q9BW71 556 aaPredicted RBP30.58■■■□□ 2.49
HCFC1R1-201ENST00000248089 USP32Q8NFA0 1604 aa30.58■■■□□ 2.49
HCFC1R1-201ENST00000248089 MINK1Q8N4C8 1332 aaPredicted RBP30.57■■■□□ 2.48
HCFC1R1-201ENST00000248089 COL22A1Q8NFW1 1626 aaPredicted RBP30.55■■■□□ 2.48
HCFC1R1-201ENST00000248089 NEUROD1Q13562 356 aa30.55■■■□□ 2.48
HCFC1R1-201ENST00000248089 ANKARQ7Z5J8 1434 aa30.51■■■□□ 2.47
HCFC1R1-201ENST00000248089 L3MBTL2Q969R5 705 aa30.51■■■□□ 2.47
HCFC1R1-201ENST00000248089 PHF8Q9UPP1 1060 aa30.5■■■□□ 2.47
HCFC1R1-201ENST00000248089 TULP4Q9NRJ4 1543 aa30.49■■■□□ 2.47
HCFC1R1-201ENST00000248089 ADAMTS2O95450 1211 aa30.48■■■□□ 2.47
HCFC1R1-201ENST00000248089 NBPF1Q3BBV0 1214 aa30.48■■■□□ 2.47
HCFC1R1-201ENST00000248089 ZNF772Q68DY9 489 aaPredicted RBP30.48■■■□□ 2.47
HCFC1R1-201ENST00000248089 C8orf37Q96NL8 207 aa30.48■■■□□ 2.47
HCFC1R1-201ENST00000248089 EIF3AQ14152 1382 aaKnown RBP30.48■■■□□ 2.47
HCFC1R1-201ENST00000248089 AFF2P51816 1311 aa30.47■■■□□ 2.47
HCFC1R1-201ENST00000248089 TRPM1Q7Z4N2 1603 aa30.46■■■□□ 2.47
HCFC1R1-201ENST00000248089 ITSN1Q15811 1721 aa30.45■■■□□ 2.47
HCFC1R1-201ENST00000248089 MARF1Q9Y4F3 1742 aaKnown RBP30.44■■■□□ 2.46
HCFC1R1-201ENST00000248089 WASLO00401 505 aaPredicted RBP30.44■■■□□ 2.46
HCFC1R1-201ENST00000248089 KRT28Q7Z3Y7 464 aa30.44■■■□□ 2.46
HCFC1R1-201ENST00000248089 PMFBP1Q8TBY8 1022 aa30.43■■■□□ 2.46
HCFC1R1-201ENST00000248089 QRICH2Q9H0J4 1663 aa30.41■■■□□ 2.46
HCFC1R1-201ENST00000248089 PRR36Q9H6K5 1346 aa30.41■■■□□ 2.46
HCFC1R1-201ENST00000248089 SPATA31A3Q5VYP0 1347 aa30.4■■■□□ 2.46
HCFC1R1-201ENST00000248089 TNS3Q68CZ2 1445 aa30.39■■■□□ 2.46
HCFC1R1-201ENST00000248089 PSME1Q06323 249 aa30.38■■■□□ 2.45
HCFC1R1-201ENST00000248089 NGLY1Q96IV0 654 aa30.38■■■□□ 2.45
HCFC1R1-201ENST00000248089 ATP7BP35670 1465 aa30.37■■■□□ 2.45
HCFC1R1-201ENST00000248089 TRPM3Q9HCF6 1732 aaPredicted RBP30.36■■■□□ 2.45
HCFC1R1-201ENST00000248089 ABCA3Q99758 1704 aa30.34■■■□□ 2.45
HCFC1R1-201ENST00000248089 TOPAZ1Q8N9V7 1692 aa30.34■■■□□ 2.45
HCFC1R1-201ENST00000248089 SBNO1A3KN83 1393 aa30.33■■■□□ 2.45
HCFC1R1-201ENST00000248089 LMOD2Q6P5Q4 547 aa30.33■■■□□ 2.45
HCFC1R1-201ENST00000248089 ROCK2O75116 1388 aaKnown RBP30.32■■■□□ 2.44
HCFC1R1-201ENST00000248089 CENPJQ9HC77 1338 aaPredicted RBP30.32■■■□□ 2.44
HCFC1R1-201ENST00000248089 PLEKHG5O94827 1062 aa30.32■■■□□ 2.44
HCFC1R1-201ENST00000248089 CDK19Q9BWU1 502 aa30.32■■■□□ 2.44
HCFC1R1-201ENST00000248089 GPRASP1Q5JY77 1395 aa30.31■■■□□ 2.44
HCFC1R1-201ENST00000248089 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
HCFC1R1-201ENST00000248089 RXRBP28702 533 aa30.3■■■□□ 2.44
HCFC1R1-201ENST00000248089 NUDT16Q96DE0 195 aaKnown RBP30.3■■■□□ 2.44
HCFC1R1-201ENST00000248089 ALS2Q96Q42 1657 aa30.3■■■□□ 2.44
HCFC1R1-201ENST00000248089 NGDNQ8NEJ9 315 aaKnown RBP30.29■■■□□ 2.44
HCFC1R1-201ENST00000248089 ARHGEF10O15013 1369 aa30.28■■■□□ 2.44
HCFC1R1-201ENST00000248089 HAP1P54257 671 aaPredicted RBP30.28■■■□□ 2.44
HCFC1R1-201ENST00000248089 QTRT2Q9H974 415 aaKnown RBP30.27■■■□□ 2.44
HCFC1R1-201ENST00000248089 USP21Q9UK80 565 aa30.27■■■□□ 2.44
HCFC1R1-201ENST00000248089 NBPF8Q3BBV2 869 aa30.24■■■□□ 2.43
HCFC1R1-201ENST00000248089 CABLES1Q8TDN4 633 aa30.24■■■□□ 2.43
HCFC1R1-201ENST00000248089 SRPK2P78362 688 aaKnown RBP30.23■■■□□ 2.43
HCFC1R1-201ENST00000248089 FNBP4Q8N3X1 1017 aaPredicted RBP30.22■■■□□ 2.43
HCFC1R1-201ENST00000248089 CDK12Q9NYV4 1490 aaPredicted RBP30.22■■■□□ 2.43
HCFC1R1-201ENST00000248089 PLCH1Q4KWH8 1693 aa30.2■■■□□ 2.43
HCFC1R1-201ENST00000248089 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.2■■■□□ 2.43
HCFC1R1-201ENST00000248089 PAK3O75914 559 aaPredicted RBP30.2■■■□□ 2.43
HCFC1R1-201ENST00000248089 RBM6P78332 1123 aaKnown RBP30.2■■■□□ 2.43
HCFC1R1-201ENST00000248089 CCDC61Q9Y6R9 512 aa30.19■■■□□ 2.42
HCFC1R1-201ENST00000248089 CABP2Q9NPB3 220 aa30.18■■■□□ 2.42
HCFC1R1-201ENST00000248089 TRPC5Q9UL62 973 aaPredicted RBP30.18■■■□□ 2.42
HCFC1R1-201ENST00000248089 RGS12O14924 1447 aa30.18■■■□□ 2.42
HCFC1R1-201ENST00000248089 CRYBG1Q9Y4K1 1723 aa30.18■■■□□ 2.42
HCFC1R1-201ENST00000248089 ATRNO75882 1429 aa30.17■■■□□ 2.42
HCFC1R1-201ENST00000248089 BCL9LQ86UU0 1499 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms