RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C FYV5P25585 152 aa0.12□□□□□ -2.39
UBX4YMR067C YBR090CP38253 122 aa0.12□□□□□ -2.39
UBX4YMR067C YBR292CP38357 123 aa0.12□□□□□ -2.39
UBX4YMR067C PAU13P38725 120 aa0.12□□□□□ -2.39
UBX4YMR067C FYV4P38783 130 aaPredicted RBP0.12□□□□□ -2.39
UBX4YMR067C TOS6P48560 102 aa0.12□□□□□ -2.39
UBX4YMR067C PAU4P53427 120 aa0.12□□□□□ -2.39
UBX4YMR067C AIM11P87275 137 aa0.12□□□□□ -2.39
UBX4YMR067C MGR2Q02889 113 aa0.12□□□□□ -2.39
UBX4YMR067C PAU10Q03050 120 aa0.12□□□□□ -2.39
UBX4YMR067C HPA2Q06592 156 aa0.12□□□□□ -2.39
UBX4YMR067C PAU20Q08322 120 aa0.12□□□□□ -2.39
UBX4YMR067C FYV7Q12247 151 aa0.12□□□□□ -2.39
UBX4YMR067C PAU9Q3E770 120 aa0.12□□□□□ -2.39
UBX4YMR067C YLL006W-AQ3E814 58 aa0.12□□□□□ -2.39
UBX4YMR067C SCS22Q6Q595 175 aa0.12□□□□□ -2.39
UBX4YMR067C YCL001W-BQ96VH2 84 aa0.12□□□□□ -2.39
UBX4YMR067C YLR255CO13574 117 aa0.11□□□□□ -2.39
UBX4YMR067C HMRA1P0CY11 126 aa0.11□□□□□ -2.39
UBX4YMR067C SRP21P32342 167 aa0.11□□□□□ -2.39
UBX4YMR067C MRPL11P36521 249 aaPredicted RBP0.11□□□□□ -2.39
UBX4YMR067C SRP14P38985 146 aa0.11□□□□□ -2.39
UBX4YMR067C RSM18P40033 138 aa0.11□□□□□ -2.39
UBX4YMR067C YER187WP40102 141 aa0.11□□□□□ -2.39
UBX4YMR067C SFT1P43682 97 aa0.11□□□□□ -2.39
UBX4YMR067C ERV14P53173 138 aa0.11□□□□□ -2.39
UBX4YMR067C YGR164WP53291 111 aa0.11□□□□□ -2.39
UBX4YMR067C TMA20P89886 181 aaPredicted RBP0.11□□□□□ -2.39
UBX4YMR067C ICY1Q04329 127 aa0.11□□□□□ -2.39
UBX4YMR067C IRC21Q04772 201 aa0.11□□□□□ -2.39
UBX4YMR067C YPR153WQ06537 140 aa0.11□□□□□ -2.39
UBX4YMR067C ATP14Q12349 124 aa0.11□□□□□ -2.39
UBX4YMR067C PAU17Q12370 124 aa0.11□□□□□ -2.39
UBX4YMR067C RPS22BQ3E7Y3 130 aaKnown RBP0.11□□□□□ -2.39
UBX4YMR067C ATP5P09457 212 aa0.1□□□□□ -2.39
UBX4YMR067C UBI4P0CG63 381 aaKnown RBP0.1□□□□□ -2.39
UBX4YMR067C NHP2P32495 156 aaPredicted RBP0.1□□□□□ -2.39
UBX4YMR067C YBL044WP38194 122 aa0.1□□□□□ -2.39
UBX4YMR067C AIM4P38305 123 aaPredicted RBP0.1□□□□□ -2.39
UBX4YMR067C SHG1P38337 142 aa0.1□□□□□ -2.39
UBX4YMR067C PHS1P40857 217 aa0.1□□□□□ -2.39
UBX4YMR067C EDC1P53080 175 aaPredicted RBP0.1□□□□□ -2.39
UBX4YMR067C YIL014C-AQ02598 104 aa0.1□□□□□ -2.39
UBX4YMR067C PAU23Q07987 124 aa0.1□□□□□ -2.39
UBX4YMR067C YPL225WQ08971 146 aaKnown RBP0.1□□□□□ -2.39
UBX4YMR067C WIP1Q2V2P8 89 aa0.1□□□□□ -2.39
UBX4YMR067C COX19Q3E731 98 aa0.1□□□□□ -2.39
UBX4YMR067C YLR361C-AQ3E795 98 aa0.1□□□□□ -2.39
UBX4YMR067C YOR316C-AQ3E806 69 aa0.1□□□□□ -2.39
UBX4YMR067C GSP1P32835 219 aaKnown RBP0.09□□□□□ -2.4
UBX4YMR067C GCV3P39726 170 aaPredicted RBP0.09□□□□□ -2.4
UBX4YMR067C MRPS12P53732 153 aa0.09□□□□□ -2.4
UBX4YMR067C RSM19P53733 91 aaPredicted RBP0.09□□□□□ -2.4
UBX4YMR067C APS2Q00381 147 aa0.09□□□□□ -2.4
UBX4YMR067C ARL3Q02804 198 aa0.09□□□□□ -2.4
UBX4YMR067C YPL261CQ08976 102 aa0.09□□□□□ -2.4
UBX4YMR067C YJL133C-AQ3E7A3 74 aa0.09□□□□□ -2.4
UBX4YMR067C YNR034W-AQ3E841 98 aa0.09□□□□□ -2.4
UBX4YMR067C MIC10Q96VH5 97 aa0.09□□□□□ -2.4
UBX4YMR067C RPL36AP05745 100 aaPredicted RBP0.08□□□□□ -2.4
UBX4YMR067C YDL022C-AP0C5L6 82 aa0.08□□□□□ -2.4
UBX4YMR067C HSP10P38910 106 aa0.08□□□□□ -2.4
UBX4YMR067C GLC8P41818 229 aa0.08□□□□□ -2.4
UBX4YMR067C ICS3P47034 131 aa0.08□□□□□ -2.4
UBX4YMR067C HHO1P53551 258 aa0.08□□□□□ -2.4
UBX4YMR067C TIM11P81449 96 aaPredicted RBP0.08□□□□□ -2.4
UBX4YMR067C LIP1Q03579 150 aa0.08□□□□□ -2.4
UBX4YMR067C YMR103CQ04436 120 aa0.08□□□□□ -2.4
UBX4YMR067C YGL194C-AQ2V2P6 80 aa0.08□□□□□ -2.4
UBX4YMR067C YOR034C-AQ3E735 80 aa0.08□□□□□ -2.4
UBX4YMR067C YOR304C-AO14468 76 aa0.07□□□□□ -2.4
UBX4YMR067C RPS30AP0CX33 63 aaKnown RBP0.07□□□□□ -2.4
UBX4YMR067C RPS30BP0CX34 63 aaKnown RBP0.07□□□□□ -2.4
UBX4YMR067C NHP6AP11632 93 aaKnown RBP0.07□□□□□ -2.4
UBX4YMR067C YHR130CP38834 111 aa0.07□□□□□ -2.4
UBX4YMR067C TDA2P40045 126 aa0.07□□□□□ -2.4
UBX4YMR067C JAC1P53193 184 aa0.07□□□□□ -2.4
UBX4YMR067C YLR050CQ12155 161 aaKnown RBP0.07□□□□□ -2.4
UBX4YMR067C YIL156W-BQ2V2P4 73 aa0.07□□□□□ -2.4
UBX4YMR067C RAD6P06104 172 aa0.06□□□□□ -2.4
UBX4YMR067C YFR009W-AP0C5M9 85 aa0.06□□□□□ -2.4
UBX4YMR067C YJR107C-AP0CT86 78 aa0.06□□□□□ -2.4
UBX4YMR067C INO4P13902 151 aa0.06□□□□□ -2.4
UBX4YMR067C COX23P38824 151 aa0.06□□□□□ -2.4
UBX4YMR067C GTT1P40582 234 aa0.06□□□□□ -2.4
UBX4YMR067C HUR1P45820 110 aa0.06□□□□□ -2.4
UBX4YMR067C SNN1P48232 102 aa0.06□□□□□ -2.4
UBX4YMR067C OLI1P61829 76 aa0.06□□□□□ -2.4
UBX4YMR067C YGR146C-AQ8TGT9 53 aa0.06□□□□□ -2.4
UBX4YMR067C YCR050CP25630 102 aa0.05□□□□□ -2.4
UBX4YMR067C YKL044WP36092 106 aa0.05□□□□□ -2.4
UBX4YMR067C POP7P38291 140 aa0.05□□□□□ -2.4
UBX4YMR067C MSL1P40567 111 aaPredicted RBP0.05□□□□□ -2.4
UBX4YMR067C ATP18P81450 59 aa0.05□□□□□ -2.4
UBX4YMR067C YHR050W-AQ05451 56 aa0.05□□□□□ -2.4
UBX4YMR067C YKL065W-AQ2V2P2 73 aa0.05□□□□□ -2.4
UBX4YMR067C VMA9Q3E7B6 73 aa0.05□□□□□ -2.4
UBX4YMR067C YOR072W-BQ3E832 53 aa0.05□□□□□ -2.4
UBX4YMR067C COA6Q3E846 104 aa0.05□□□□□ -2.4
UBX4YMR067C MRPL44P19956 98 aa0.04□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms