RNA–Protein interactions for RNA: YMR008C

PLB1, Transcript of Phospholipase B (lysophospholipase) involved in lipid metabolism, yeastyeast

Gene PLB1, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PLB1YMR008C RAD6P06104 172 aa6.71□□□□□ -1.33
PLB1YMR008C MRP10O75012 95 aa6.7□□□□□ -1.34
PLB1YMR008C YDR034C-AP0C289 58 aa6.69□□□□□ -1.34
PLB1YMR008C SFT1P43682 97 aa6.69□□□□□ -1.34
PLB1YMR008C YGL193CP53097 103 aa6.69□□□□□ -1.34
PLB1YMR008C EDC1P53080 175 aaPredicted RBP6.69□□□□□ -1.34
PLB1YMR008C BET1P22804 142 aa6.68□□□□□ -1.34
PLB1YMR008C EMC6Q12431 108 aa6.68□□□□□ -1.34
PLB1YMR008C YLR156WP0CE96 114 aa6.68□□□□□ -1.34
PLB1YMR008C YLR159WP0CE97 114 aa6.68□□□□□ -1.34
PLB1YMR008C YLR161WP0CE98 114 aa6.68□□□□□ -1.34
PLB1YMR008C YAR1P46683 200 aa6.67□□□□□ -1.34
PLB1YMR008C RSM19P53733 91 aaPredicted RBP6.66□□□□□ -1.34
PLB1YMR008C SPT4P32914 102 aaPredicted RBP6.66□□□□□ -1.34
PLB1YMR008C YNL184CP53876 108 aa6.64□□□□□ -1.35
PLB1YMR008C DDR2P89113 61 aa6.64□□□□□ -1.35
PLB1YMR008C YHL042WP38729 150 aa6.63□□□□□ -1.35
PLB1YMR008C GIS2P53849 153 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
PLB1YMR008C RPL38P49167 78 aaKnown RBP6.62□□□□□ -1.35
PLB1YMR008C ICS3P47034 131 aa6.61□□□□□ -1.35
PLB1YMR008C BSC4P53841 131 aa6.6□□□□□ -1.35
PLB1YMR008C YER039C-AP0CD97 72 aa6.6□□□□□ -1.35
PLB1YMR008C YHR007C-AQ07074 71 aa6.6□□□□□ -1.35
PLB1YMR008C YDR119W-AQ2V2P9 66 aa6.6□□□□□ -1.35
PLB1YMR008C YLR285C-AQ3E771 56 aa6.6□□□□□ -1.35
PLB1YMR008C RPL36BO14455 100 aaKnown RBP6.59□□□□□ -1.35
PLB1YMR008C YGR039WP53225 103 aa6.59□□□□□ -1.35
PLB1YMR008C TDA2P40045 126 aa6.58□□□□□ -1.36
PLB1YMR008C SHH4Q06236 168 aa6.58□□□□□ -1.36
PLB1YMR008C YSY6P38374 65 aa6.58□□□□□ -1.36
PLB1YMR008C COF1Q03048 143 aaKnown RBP6.58□□□□□ -1.36
PLB1YMR008C YHR213W-BQ8TGK1 99 aa6.58□□□□□ -1.36
PLB1YMR008C RPP2AP05319 106 aaKnown RBP6.57□□□□□ -1.36
PLB1YMR008C YOR072WQ08486 104 aa6.57□□□□□ -1.36
PLB1YMR008C EDC2P40023 145 aaPredicted RBP6.56□□□□□ -1.36
PLB1YMR008C COX23P38824 151 aa6.55□□□□□ -1.36
PLB1YMR008C RSM18P40033 138 aa6.55□□□□□ -1.36
PLB1YMR008C YOL014WQ08110 124 aa6.54□□□□□ -1.36
PLB1YMR008C LCL2Q08045 131 aa6.53□□□□□ -1.36
PLB1YMR008C YJL133C-AQ3E7A3 74 aa6.53□□□□□ -1.36
PLB1YMR008C TDA8Q6B2U8 126 aa6.53□□□□□ -1.36
PLB1YMR008C YHL018WP38744 120 aaPredicted RBP6.53□□□□□ -1.36
PLB1YMR008C YPL038W-AQ3E7B4 63 aa6.51□□□□□ -1.37
PLB1YMR008C ATP20Q12233 115 aa6.51□□□□□ -1.37
PLB1YMR008C YBL112CQ3E7Y4 105 aa6.51□□□□□ -1.37
PLB1YMR008C YMR230W-AQ3E7B5 62 aa6.49□□□□□ -1.37
PLB1YMR008C YGR121W-AQ3E816 71 aa6.49□□□□□ -1.37
PLB1YMR008C ECM19Q06011 112 aa6.48□□□□□ -1.37
PLB1YMR008C YEL045CP32616 141 aa6.45□□□□□ -1.38
PLB1YMR008C YLR162WQ06235 118 aa6.45□□□□□ -1.38
PLB1YMR008C LCL1Q02786 101 aa6.44□□□□□ -1.38
PLB1YMR008C YKL183C-AQ3E765 70 aa6.44□□□□□ -1.38
PLB1YMR008C MIC10Q96VH5 97 aa6.44□□□□□ -1.38
PLB1YMR008C YJL197C-AP0C5P0 93 aa6.42□□□□□ -1.38
PLB1YMR008C YCR050CP25630 102 aa6.42□□□□□ -1.38
PLB1YMR008C SPG1P50088 95 aa6.42□□□□□ -1.38
PLB1YMR008C YBR027CP38220 110 aa6.4□□□□□ -1.39
PLB1YMR008C YLR415CO13578 112 aa6.39□□□□□ -1.39
PLB1YMR008C YJR085CP47131 105 aaKnown RBP6.39□□□□□ -1.39
PLB1YMR008C MMS2P53152 137 aa6.38□□□□□ -1.39
PLB1YMR008C YDR246W-AQ3E763 66 aa6.38□□□□□ -1.39
PLB1YMR008C YOR304C-AO14468 76 aa6.37□□□□□ -1.39
PLB1YMR008C TOM6P33448 61 aa6.37□□□□□ -1.39
PLB1YMR008C YOR314WQ12506 109 aa6.36□□□□□ -1.39
PLB1YMR008C YER187WP40102 141 aa6.35□□□□□ -1.39
PLB1YMR008C NOP10Q6Q547 58 aaPredicted RBP6.35□□□□□ -1.39
PLB1YMR008C YBR182C-AQ8TGU6 64 aa6.35□□□□□ -1.39
PLB1YMR008C HOT13P36078 116 aa6.32□□□□□ -1.4
PLB1YMR008C YOR268CQ08734 132 aa6.32□□□□□ -1.4
PLB1YMR008C AIM4P38305 123 aaPredicted RBP6.29□□□□□ -1.4
PLB1YMR008C YPL080CQ02826 108 aa6.28□□□□□ -1.4
PLB1YMR008C YCR043CP25361 127 aa6.27□□□□□ -1.4
PLB1YMR008C YAR064WP39563 99 aa6.27□□□□□ -1.4
PLB1YMR008C MDN1Q12019 4910 aaKnown RBP6.27□□□□□ -1.41
PLB1YMR008C YLR157W-DP0CE99 70 aa6.27□□□□□ -1.41
PLB1YMR008C YGL149WP53116 101 aa6.27□□□□□ -1.41
PLB1YMR008C YOL097W-AQ3E7Y9 61 aa6.27□□□□□ -1.41
PLB1YMR008C DDR48P18899 430 aaKnown RBP6.26□□□□□ -1.41
PLB1YMR008C YOL166W-AQ8TGJ1 51 aa6.24□□□□□ -1.41
PLB1YMR008C RPL36AP05745 100 aaPredicted RBP6.22□□□□□ -1.41
PLB1YMR008C YIL102CP40488 101 aa6.22□□□□□ -1.41
PLB1YMR008C LIP1Q03579 150 aa6.22□□□□□ -1.41
PLB1YMR008C YKL069WP36088 180 aa6.21□□□□□ -1.42
PLB1YMR008C YDR182W-AQ3E796 67 aa6.2□□□□□ -1.42
PLB1YMR008C YOL013W-AP0C272 63 aaPredicted RBP6.2□□□□□ -1.42
PLB1YMR008C YIR021W-AQ3E739 70 aa6.2□□□□□ -1.42
PLB1YMR008C YDL012CQ12489 107 aa6.17□□□□□ -1.42
PLB1YMR008C YPR153WQ06537 140 aa6.13□□□□□ -1.43
PLB1YMR008C KSH1Q8TGJ3 72 aa6.1□□□□□ -1.43
PLB1YMR008C YHL005CP38752 130 aa6.09□□□□□ -1.43
PLB1YMR008C KTI11Q3E840 82 aa6.08□□□□□ -1.44
PLB1YMR008C RPS30AP0CX33 63 aaKnown RBP6.06□□□□□ -1.44
PLB1YMR008C RPS30BP0CX34 63 aaKnown RBP6.06□□□□□ -1.44
PLB1YMR008C YHR073W-AP0C5N7 58 aa6.06□□□□□ -1.44
PLB1YMR008C YFL067WP43537 175 aa6.05□□□□□ -1.44
PLB1YMR008C YLR361C-AQ3E795 98 aa6.05□□□□□ -1.44
PLB1YMR008C YHR125WP38831 101 aa6.04□□□□□ -1.44
PLB1YMR008C YDR010CQ12426 110 aa6.03□□□□□ -1.44
PLB1YMR008C HHF1P02309 103 aaKnown RBP5.99□□□□□ -1.45
PLB1YMR008C YJR128WP47162 119 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms