RNA–Protein interactions for RNA: YLL028W

TPO1, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO1YLL028W SMD1Q02260 146 aaPredicted RBP5.31□□□□□ -1.56
TPO1YLL028W RPL29P05747 59 aaPredicted RBP5.3□□□□□ -1.56
TPO1YLL028W YGR164WP53291 111 aa5.3□□□□□ -1.56
TPO1YLL028W IGD1P43598 195 aa5.29□□□□□ -1.56
TPO1YLL028W YDL241WQ07738 123 aa5.29□□□□□ -1.56
TPO1YLL028W YNL162W-AQ3E7A8 72 aa5.29□□□□□ -1.56
TPO1YLL028W RPL11BQ3E757 174 aaPredicted RBP5.29□□□□□ -1.56
TPO1YLL028W YDR246W-AQ3E763 66 aa5.29□□□□□ -1.56
TPO1YLL028W YLR285C-AQ3E771 56 aa5.29□□□□□ -1.56
TPO1YLL028W RPL11AP0C0W9 174 aaKnown RBP5.28□□□□□ -1.56
TPO1YLL028W AQY2P0CD90 149 aa5.28□□□□□ -1.56
TPO1YLL028W UBC4P15731 148 aa5.28□□□□□ -1.56
TPO1YLL028W ATP18P81450 59 aa5.28□□□□□ -1.56
TPO1YLL028W YLR281CQ05863 155 aa5.28□□□□□ -1.56
TPO1YLL028W AUA1P32450 94 aa5.27□□□□□ -1.57
TPO1YLL028W YFR009W-AP0C5M9 85 aa5.26□□□□□ -1.57
TPO1YLL028W GAT4P40569 121 aa5.26□□□□□ -1.57
TPO1YLL028W YFL019CP43576 117 aa5.26□□□□□ -1.57
TPO1YLL028W SFT1P43682 97 aa5.26□□□□□ -1.57
TPO1YLL028W YBL039W-BP0C268 59 aa5.24□□□□□ -1.57
TPO1YLL028W YLR156WP0CE96 114 aa5.24□□□□□ -1.57
TPO1YLL028W YLR159WP0CE97 114 aa5.24□□□□□ -1.57
TPO1YLL028W YLR161WP0CE98 114 aa5.24□□□□□ -1.57
TPO1YLL028W YPR010C-AA5Z2X5 72 aa5.23□□□□□ -1.57
TPO1YLL028W YNL277W-AQ3E7Z0 62 aa5.23□□□□□ -1.57
TPO1YLL028W TDA8Q6B2U8 126 aa5.23□□□□□ -1.57
TPO1YLL028W AIM4P38305 123 aaPredicted RBP5.22□□□□□ -1.57
TPO1YLL028W SPC1P46965 94 aa5.22□□□□□ -1.57
TPO1YLL028W YBR230W-AQ3E762 66 aa5.22□□□□□ -1.57
TPO1YLL028W YLR307C-AQ3E825 87 aa5.21□□□□□ -1.57
TPO1YLL028W RSM19P53733 91 aaPredicted RBP5.21□□□□□ -1.58
TPO1YLL028W ATP20Q12233 115 aa5.21□□□□□ -1.58
TPO1YLL028W YLR122CQ12312 125 aa5.21□□□□□ -1.58
TPO1YLL028W YKL183C-AQ3E765 70 aa5.2□□□□□ -1.58
TPO1YLL028W RTC6O14464 93 aa5.19□□□□□ -1.58
TPO1YLL028W RPL38P49167 78 aaKnown RBP5.19□□□□□ -1.58
TPO1YLL028W YJL127C-BQ3E828 52 aa5.19□□□□□ -1.58
TPO1YLL028W FYV5P25585 152 aa5.18□□□□□ -1.58
TPO1YLL028W YAR023CD6VPM8 179 aa5.16□□□□□ -1.58
TPO1YLL028W YOL014WQ08110 124 aa5.16□□□□□ -1.58
TPO1YLL028W RPL26AP05743 127 aaKnown RBP5.16□□□□□ -1.58
TPO1YLL028W RPL26BP53221 127 aaKnown RBP5.16□□□□□ -1.58
TPO1YLL028W SNA2P56508 79 aa5.16□□□□□ -1.58
TPO1YLL028W YOR268CQ08734 132 aa5.15□□□□□ -1.58
TPO1YLL028W ICS3P47034 131 aa5.14□□□□□ -1.59
TPO1YLL028W TSC3Q3E790 80 aa5.14□□□□□ -1.59
TPO1YLL028W Q0032Q9ZZX7 96 aa5.14□□□□□ -1.59
TPO1YLL028W RSM18P40033 138 aa5.14□□□□□ -1.59
TPO1YLL028W NOP10Q6Q547 58 aaPredicted RBP5.13□□□□□ -1.59
TPO1YLL028W YNL042W-BQ3E7Z2 85 aa5.12□□□□□ -1.59
TPO1YLL028W MIC10Q96VH5 97 aa5.11□□□□□ -1.59
TPO1YLL028W PEX22P39718 180 aa5.11□□□□□ -1.59
TPO1YLL028W SPT4P32914 102 aaPredicted RBP5.1□□□□□ -1.59
TPO1YLL028W TDA2P40045 126 aa5.1□□□□□ -1.59
TPO1YLL028W YLR162WQ06235 118 aa5.1□□□□□ -1.59
TPO1YLL028W YHR213W-BQ8TGK1 99 aa5.1□□□□□ -1.59
TPO1YLL028W MMS2P53152 137 aa5.09□□□□□ -1.59
TPO1YLL028W YOR314WQ12506 109 aa5.09□□□□□ -1.59
TPO1YLL028W YGR121W-AQ3E816 71 aa5.09□□□□□ -1.59
TPO1YLL028W GIS2P53849 153 aaKnown RBP RIP-Chip data5.09□□□□□ -1.6 RIP-Chip
TPO1YLL028W YDR182W-AQ3E796 67 aa5.09□□□□□ -1.6
TPO1YLL028W RPL36BO14455 100 aaKnown RBP5.08□□□□□ -1.6
TPO1YLL028W RPL36AP05745 100 aaPredicted RBP5.08□□□□□ -1.6
TPO1YLL028W COX23P38824 151 aa5.08□□□□□ -1.6
TPO1YLL028W YPR195CQ06594 109 aa5.08□□□□□ -1.6
TPO1YLL028W YOR381W-AQ3E804 55 aa5.08□□□□□ -1.6
TPO1YLL028W BSC4P53841 131 aa5.07□□□□□ -1.6
TPO1YLL028W YHR007C-AQ07074 71 aa5.07□□□□□ -1.6
TPO1YLL028W YOL166W-AQ8TGJ1 51 aa5.07□□□□□ -1.6
TPO1YLL028W YJL133C-AQ3E7A3 74 aa5.06□□□□□ -1.6
TPO1YLL028W EDC2P40023 145 aaPredicted RBP5.06□□□□□ -1.6
TPO1YLL028W YGL193CP53097 103 aa5.06□□□□□ -1.6
TPO1YLL028W YHL005CP38752 130 aa5.05□□□□□ -1.6
TPO1YLL028W HHF1P02309 103 aaKnown RBP5.04□□□□□ -1.6
TPO1YLL028W DDR2P89113 61 aa5.04□□□□□ -1.6
TPO1YLL028W YMR230W-AQ3E7B5 62 aa5.04□□□□□ -1.6
TPO1YLL028W ECM19Q06011 112 aa5.02□□□□□ -1.61
TPO1YLL028W YGL041C-BQ3E750 60 aa5.01□□□□□ -1.61
TPO1YLL028W YMR122CQ03879 124 aa5.01□□□□□ -1.61
TPO1YLL028W YOR072WQ08486 104 aa5.01□□□□□ -1.61
TPO1YLL028W RPS30AP0CX33 63 aaKnown RBP5□□□□□ -1.61
TPO1YLL028W RPS30BP0CX34 63 aaKnown RBP5□□□□□ -1.61
TPO1YLL028W YEL045CP32616 141 aa5□□□□□ -1.61
TPO1YLL028W YKL065W-AQ2V2P2 73 aa5□□□□□ -1.61
TPO1YLL028W MRP10O75012 95 aa4.99□□□□□ -1.61
TPO1YLL028W YDR034C-AP0C289 58 aa4.98□□□□□ -1.61
TPO1YLL028W YER188C-AP0C0V2 99 aa4.97□□□□□ -1.61
TPO1YLL028W YOR376W-AQ3E805 51 aa4.97□□□□□ -1.61
TPO1YLL028W YJL197C-AP0C5P0 93 aa4.96□□□□□ -1.61
TPO1YLL028W OST5Q92316 86 aa4.96□□□□□ -1.61
TPO1YLL028W YGL034CP53186 121 aa4.95□□□□□ -1.62
TPO1YLL028W LIP1Q03579 150 aa4.93□□□□□ -1.62
TPO1YLL028W YPR153WQ06537 140 aa4.93□□□□□ -1.62
TPO1YLL028W YIL102CP40488 101 aa4.91□□□□□ -1.62
TPO1YLL028W HOT13P36078 116 aa4.9□□□□□ -1.63
TPO1YLL028W YBR027CP38220 110 aa4.9□□□□□ -1.63
TPO1YLL028W YML100W-AQ8TGT0 57 aa4.89□□□□□ -1.63
TPO1YLL028W LCL2Q08045 131 aa4.88□□□□□ -1.63
TPO1YLL028W YCR043CP25361 127 aa4.86□□□□□ -1.63
TPO1YLL028W YOL013W-AP0C272 63 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms