RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W VPS55P47111 140 aa2.47□□□□□ -2.01
NUP85YJR042W HPA2Q06592 156 aa2.47□□□□□ -2.01
NUP85YJR042W OST5Q92316 86 aa2.47□□□□□ -2.01
NUP85YJR042W YEL014CP39999 101 aa2.46□□□□□ -2.01
NUP85YJR042W PRM7Q12459 698 aa2.46□□□□□ -2.01
NUP85YJR042W MRPS12P53732 153 aa2.46□□□□□ -2.02
NUP85YJR042W HOR7Q05827 59 aa2.46□□□□□ -2.02
NUP85YJR042W YOR011W-AQ3E807 68 aa2.46□□□□□ -2.02
NUP85YJR042W YJL144WP47009 104 aa2.45□□□□□ -2.02
NUP85YJR042W QCR8P08525 94 aa2.44□□□□□ -2.02
NUP85YJR042W SHU1P38751 150 aa2.44□□□□□ -2.02
NUP85YJR042W YFL065CP43539 102 aa2.44□□□□□ -2.02
NUP85YJR042W YPR203WQ08994 102 aa2.44□□□□□ -2.02
NUP85YJR042W URA2P07259 2214 aaKnown RBP2.44□□□□□ -2.02
NUP85YJR042W AIM4P38305 123 aaPredicted RBP2.44□□□□□ -2.02
NUP85YJR042W YCR085WP25650 117 aa2.43□□□□□ -2.02
NUP85YJR042W RPA12P32529 125 aaKnown RBP2.43□□□□□ -2.02
NUP85YJR042W Q0297Q9ZZV8 51 aa2.43□□□□□ -2.02
NUP85YJR042W YBR056W-AI2HB52 66 aa2.42□□□□□ -2.02
NUP85YJR042W NRG2P38082 220 aa2.42□□□□□ -2.02
NUP85YJR042W YEL008WP40001 126 aa2.42□□□□□ -2.02
NUP85YJR042W RGM1Q00453 211 aa2.42□□□□□ -2.02
NUP85YJR042W TRA1P38811 3744 aa2.42□□□□□ -2.02
NUP85YJR042W RPS11AP0CX47 156 aaKnown RBP2.42□□□□□ -2.02
NUP85YJR042W RPS11BP0CX48 156 aaKnown RBP2.42□□□□□ -2.02
NUP85YJR042W PMP3P87284 55 aa2.42□□□□□ -2.02
NUP85YJR042W YNL190WP53872 204 aa2.41□□□□□ -2.02
NUP85YJR042W EMC6Q12431 108 aa2.41□□□□□ -2.02
NUP85YJR042W YLR285C-AQ3E771 56 aa2.41□□□□□ -2.02
NUP85YJR042W TAR1Q8TGM6 124 aa2.41□□□□□ -2.02
NUP85YJR042W ICY1Q04329 127 aa2.41□□□□□ -2.02
NUP85YJR042W COX12Q01519 83 aa2.4□□□□□ -2.03
NUP85YJR042W YFL041W-AQ3E817 63 aa2.4□□□□□ -2.03
NUP85YJR042W YJL197C-AP0C5P0 93 aa2.4□□□□□ -2.03
NUP85YJR042W DSE2P38844 325 aa2.4□□□□□ -2.03
NUP85YJR042W MPC2P38857 129 aa2.4□□□□□ -2.03
NUP85YJR042W YMR175W-AQ3E766 64 aa2.4□□□□□ -2.03
NUP85YJR042W YGL014C-AP0C5N1 53 aa2.39□□□□□ -2.03
NUP85YJR042W RPL36BO14455 100 aaKnown RBP2.38□□□□□ -2.03
NUP85YJR042W RPL36AP05745 100 aaPredicted RBP2.38□□□□□ -2.03
NUP85YJR042W AIM19P40502 157 aa2.38□□□□□ -2.03
NUP85YJR042W YDR381C-AQ3E6R5 114 aa2.38□□□□□ -2.03
NUP85YJR042W ENV10Q99382 181 aa2.38□□□□□ -2.03
NUP85YJR042W YGR240C-AQ3E786 66 aa2.38□□□□□ -2.03
NUP85YJR042W ERI1P62651 68 aaKnown RBP2.37□□□□□ -2.03
NUP85YJR042W VAM10Q08474 114 aa2.37□□□□□ -2.03
NUP85YJR042W YMR122W-AQ3E842 84 aa2.37□□□□□ -2.03
NUP85YJR042W YHR212W-AP0CX91 67 aa2.37□□□□□ -2.03
NUP85YJR042W YBR219CP38317 127 aa2.37□□□□□ -2.03
NUP85YJR042W ICS3P47034 131 aa2.37□□□□□ -2.03
NUP85YJR042W YBR027CP38220 110 aa2.36□□□□□ -2.03
NUP85YJR042W RSM18P40033 138 aa2.36□□□□□ -2.03
NUP85YJR042W YLL006W-AQ3E814 58 aa2.36□□□□□ -2.03
NUP85YJR042W PRP8P33334 2413 aaKnown RBP2.36□□□□□ -2.03
NUP85YJR042W SPC1P46965 94 aa2.36□□□□□ -2.03
NUP85YJR042W TEL1P38110 2787 aa2.35□□□□□ -2.03
NUP85YJR042W YDR119W-AQ2V2P9 66 aa2.35□□□□□ -2.03
NUP85YJR042W YAL065CO13511 128 aa2.34□□□□□ -2.03
NUP85YJR042W RPL29P05747 59 aaPredicted RBP2.34□□□□□ -2.03
NUP85YJR042W RPL43AP0CX25 92 aaKnown RBP2.34□□□□□ -2.03
NUP85YJR042W RPL43BP0CX26 92 aa2.34□□□□□ -2.03
NUP85YJR042W YJR107C-AP0CT86 78 aa2.33□□□□□ -2.04
NUP85YJR042W IRC21Q04772 201 aa2.33□□□□□ -2.04
NUP85YJR042W MEC1P38111 2368 aa2.33□□□□□ -2.04
NUP85YJR042W YPR010C-AA5Z2X5 72 aa2.33□□□□□ -2.04
NUP85YJR042W RPC10P40422 70 aa2.32□□□□□ -2.04
NUP85YJR042W YHR007C-AQ07074 71 aa2.32□□□□□ -2.04
NUP85YJR042W YOR034C-AQ3E735 80 aa2.32□□□□□ -2.04
NUP85YJR042W YCR001WP25347 104 aa2.32□□□□□ -2.04
NUP85YJR042W YPL038W-AQ3E7B4 63 aa2.32□□□□□ -2.04
NUP85YJR042W RPL33AP05744 107 aaKnown RBP2.31□□□□□ -2.04
NUP85YJR042W YSY6P38374 65 aa2.31□□□□□ -2.04
NUP85YJR042W MVB12P42939 101 aa2.31□□□□□ -2.04
NUP85YJR042W ATP18P81450 59 aa2.31□□□□□ -2.04
NUP85YJR042W YDL012CQ12489 107 aa2.31□□□□□ -2.04
NUP85YJR042W YCR095W-AQ3E787 52 aa2.31□□□□□ -2.04
NUP85YJR042W YGR035W-AQ45U48 73 aa2.31□□□□□ -2.04
NUP85YJR042W SGF11Q03067 99 aa2.3□□□□□ -2.04
NUP85YJR042W YMR122CQ03879 124 aa2.3□□□□□ -2.04
NUP85YJR042W YLR162WQ06235 118 aa2.3□□□□□ -2.04
NUP85YJR042W TOM6P33448 61 aa2.3□□□□□ -2.04
NUP85YJR042W YHL005CP38752 130 aa2.3□□□□□ -2.04
NUP85YJR042W YBL039W-BP0C268 59 aa2.29□□□□□ -2.04
NUP85YJR042W AQY2P0CD90 149 aa2.29□□□□□ -2.04
NUP85YJR042W YCL042WP25572 119 aa2.27□□□□□ -2.05
NUP85YJR042W YFR009W-AP0C5M9 85 aa2.27□□□□□ -2.05
NUP85YJR042W EDC1P53080 175 aaPredicted RBP2.26□□□□□ -2.05
NUP85YJR042W YBR230W-AQ3E762 66 aa2.26□□□□□ -2.05
NUP85YJR042W YLR307C-AQ3E825 87 aa2.26□□□□□ -2.05
NUP85YJR042W YLL066W-BQ8TGJ7 56 aa2.25□□□□□ -2.05
NUP85YJR042W YJL127C-BQ3E828 52 aa2.25□□□□□ -2.05
NUP85YJR042W RPL38P49167 78 aaKnown RBP2.24□□□□□ -2.05
NUP85YJR042W LCL2Q08045 131 aa2.24□□□□□ -2.05
NUP85YJR042W YHR086W-AQ3E746 53 aa2.24□□□□□ -2.05
NUP85YJR042W YDR246W-AQ3E763 66 aa2.24□□□□□ -2.05
NUP85YJR042W YNL042W-BQ3E7Z2 85 aa2.24□□□□□ -2.05
NUP85YJR042W TOR1P35169 2470 aa2.24□□□□□ -2.05
NUP85YJR042W SNA2P56508 79 aa2.23□□□□□ -2.05
NUP85YJR042W YLR255CO13574 117 aa2.22□□□□□ -2.05
NUP85YJR042W YOR314WQ12506 109 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms