RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W RSM18P40033 138 aa4.9□□□□□ -1.63
CPD1YGR247W MPC3P53311 146 aa4.9□□□□□ -1.63
CPD1YGR247W SEN15Q04675 128 aa4.9□□□□□ -1.63
CPD1YGR247W FYV7Q12247 151 aa4.9□□□□□ -1.63
CPD1YGR247W COA6Q3E846 104 aa4.9□□□□□ -1.63
CPD1YGR247W YOL097W-AQ3E7Y9 61 aa4.88□□□□□ -1.63
CPD1YGR247W YAR1P46683 200 aa4.87□□□□□ -1.63
CPD1YGR247W TDA8Q6B2U8 126 aa4.85□□□□□ -1.63
CPD1YGR247W CGR1P53188 120 aa4.84□□□□□ -1.63
CPD1YGR247W ELC1Q03071 99 aa4.84□□□□□ -1.63
CPD1YGR247W CWC27Q02770 301 aa4.83□□□□□ -1.64
CPD1YGR247W FUN14P18411 198 aa4.82□□□□□ -1.64
CPD1YGR247W DSE2P38844 325 aa4.82□□□□□ -1.64
CPD1YGR247W HUR1P45820 110 aa4.82□□□□□ -1.64
CPD1YGR247W YKL069WP36088 180 aa4.81□□□□□ -1.64
CPD1YGR247W FYV12Q08559 129 aa4.81□□□□□ -1.64
CPD1YGR247W NHP2P32495 156 aaPredicted RBP4.8□□□□□ -1.64
CPD1YGR247W RSM19P53733 91 aaPredicted RBP4.78□□□□□ -1.64
CPD1YGR247W Q0017Q9ZZX8 53 aa4.78□□□□□ -1.64
CPD1YGR247W UIP3P39547 235 aa4.77□□□□□ -1.65
CPD1YGR247W TSC3Q3E790 80 aa4.76□□□□□ -1.65
CPD1YGR247W TIM11P81449 96 aaPredicted RBP4.75□□□□□ -1.65
CPD1YGR247W NAT5Q08689 176 aa4.75□□□□□ -1.65
CPD1YGR247W YER181CP40097 107 aa4.74□□□□□ -1.65
CPD1YGR247W YLR162WQ06235 118 aa4.74□□□□□ -1.65
CPD1YGR247W POP7P38291 140 aa4.72□□□□□ -1.65
CPD1YGR247W YML108WQ03759 105 aa4.71□□□□□ -1.66
CPD1YGR247W MIC10Q96VH5 97 aa4.71□□□□□ -1.66
CPD1YGR247W LSM6Q06406 86 aaKnown RBP4.7□□□□□ -1.66
CPD1YGR247W YHR213W-BQ8TGK1 99 aa4.7□□□□□ -1.66
CPD1YGR247W YJR107C-AP0CT86 78 aa4.68□□□□□ -1.66
CPD1YGR247W ECM19Q06011 112 aa4.68□□□□□ -1.66
CPD1YGR247W PAI3P01094 68 aa4.67□□□□□ -1.66
CPD1YGR247W COF1Q03048 143 aaKnown RBP4.67□□□□□ -1.66
CPD1YGR247W SHH4Q06236 168 aa4.67□□□□□ -1.66
CPD1YGR247W YJL133C-AQ3E7A3 74 aa4.67□□□□□ -1.66
CPD1YGR247W YFR009W-AP0C5M9 85 aa4.65□□□□□ -1.67
CPD1YGR247W YJR128WP47162 119 aa4.65□□□□□ -1.67
CPD1YGR247W ATP18P81450 59 aa4.65□□□□□ -1.67
CPD1YGR247W YDR210WQ03482 75 aa4.64□□□□□ -1.67
CPD1YGR247W YLR363W-AQ3E747 85 aa4.64□□□□□ -1.67
CPD1YGR247W YER187WP40102 141 aa4.62□□□□□ -1.67
CPD1YGR247W YLR296WQ05898 108 aa4.62□□□□□ -1.67
CPD1YGR247W ICS3P47034 131 aa4.61□□□□□ -1.67
CPD1YGR247W YHR073W-AP0C5N7 58 aa4.6□□□□□ -1.67
CPD1YGR247W YBR182C-AQ8TGU6 64 aa4.59□□□□□ -1.67
CPD1YGR247W YJL009WP47078 108 aa4.58□□□□□ -1.68
CPD1YGR247W YLR361C-AQ3E795 98 aa4.56□□□□□ -1.68
CPD1YGR247W COX23P38824 151 aa4.55□□□□□ -1.68
CPD1YGR247W EDC1P53080 175 aaPredicted RBP4.54□□□□□ -1.68
CPD1YGR247W YGR164WP53291 111 aa4.52□□□□□ -1.69
CPD1YGR247W YDL085C-AQ3E7B7 68 aaKnown RBP4.51□□□□□ -1.69
CPD1YGR247W ISD11Q6Q560 94 aa4.51□□□□□ -1.69
CPD1YGR247W YGL034CP53186 121 aa4.5□□□□□ -1.69
CPD1YGR247W SAE3P89114 91 aa4.5□□□□□ -1.69
CPD1YGR247W YPR153WQ06537 140 aa4.47□□□□□ -1.69
CPD1YGR247W YOL014WQ08110 124 aa4.47□□□□□ -1.69
CPD1YGR247W YDL012CQ12489 107 aa4.47□□□□□ -1.69
CPD1YGR247W RPL36AP05745 100 aaPredicted RBP4.46□□□□□ -1.7
CPD1YGR247W YDR381C-AQ3E6R5 114 aa4.46□□□□□ -1.7
CPD1YGR247W YOR316C-AQ3E806 69 aa4.45□□□□□ -1.7
CPD1YGR247W YOR304C-AO14468 76 aa4.43□□□□□ -1.7
CPD1YGR247W YIL102C-AQ2V2P5 75 aa4.43□□□□□ -1.7
CPD1YGR247W RPS29AP41057 56 aaKnown RBP4.42□□□□□ -1.7
CPD1YGR247W GLC8P41818 229 aa4.42□□□□□ -1.7
CPD1YGR247W YAR064WP39563 99 aa4.41□□□□□ -1.7
CPD1YGR247W TDA2P40045 126 aa4.41□□□□□ -1.7
CPD1YGR247W RPL38P49167 78 aaKnown RBP4.4□□□□□ -1.71
CPD1YGR247W YHL042WP38729 150 aa4.39□□□□□ -1.71
CPD1YGR247W RPS29BP41058 56 aaKnown RBP4.39□□□□□ -1.71
CPD1YGR247W YJL144WP47009 104 aa4.38□□□□□ -1.71
CPD1YGR247W YCR050CP25630 102 aa4.37□□□□□ -1.71
CPD1YGR247W SKI6P46948 246 aaPredicted RBP4.37□□□□□ -1.71
CPD1YGR247W LSM8P47093 109 aaKnown RBP4.36□□□□□ -1.71
CPD1YGR247W YNL198CP40166 100 aa4.31□□□□□ -1.72
CPD1YGR247W ATP20Q12233 115 aa4.29□□□□□ -1.72
CPD1YGR247W PBI2P0CT04 75 aaKnown RBP4.28□□□□□ -1.72
CPD1YGR247W YBR016WP38216 128 aa4.27□□□□□ -1.73
CPD1YGR247W RAD6P06104 172 aa4.25□□□□□ -1.73
CPD1YGR247W LIP1Q03579 150 aa4.23□□□□□ -1.73
CPD1YGR247W LSO2Q3E772 92 aaKnown RBP4.23□□□□□ -1.73
CPD1YGR247W RPP2AP05319 106 aaKnown RBP4.21□□□□□ -1.74
CPD1YGR247W YML054C-AQ3E809 52 aa4.21□□□□□ -1.74
CPD1YGR247W YLR255CO13574 117 aa4.2□□□□□ -1.74
CPD1YGR247W YPR170W-BP0C5R9 85 aa4.2□□□□□ -1.74
CPD1YGR247W HHF1P02309 103 aaKnown RBP4.19□□□□□ -1.74
CPD1YGR247W YPL080CQ02826 108 aa4.19□□□□□ -1.74
CPD1YGR247W RPA12P32529 125 aaKnown RBP4.17□□□□□ -1.74
CPD1YGR247W YBL008W-AQ3E821 79 aa4.15□□□□□ -1.75
CPD1YGR247W YGR039WP53225 103 aa4.1□□□□□ -1.75
CPD1YGR247W COX8P04039 78 aa4.09□□□□□ -1.75
CPD1YGR247W YCR085WP25650 117 aa4.09□□□□□ -1.75
CPD1YGR247W YGR146C-AQ8TGT9 53 aa4.09□□□□□ -1.75
CPD1YGR247W TMA7Q3E764 64 aaKnown RBP4.07□□□□□ -1.76
CPD1YGR247W YIL156W-BQ2V2P4 73 aa4.04□□□□□ -1.76
CPD1YGR247W YLR285C-AQ3E771 56 aa4.03□□□□□ -1.76
CPD1YGR247W YOL013W-AP0C272 63 aaPredicted RBP4.01□□□□□ -1.77
CPD1YGR247W RPS30AP0CX33 63 aaKnown RBP4.01□□□□□ -1.77
CPD1YGR247W RPS30BP0CX34 63 aaKnown RBP4.01□□□□□ -1.77
CPD1YGR247W YBL044WP38194 122 aa4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms