RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C YBL039W-BP0C268 59 aa5.01□□□□□ -1.61
NUP57YGR119C YFL067WP43537 175 aa5.01□□□□□ -1.61
NUP57YGR119C YLR285C-AQ3E771 56 aa5.01□□□□□ -1.61
NUP57YGR119C YFR009W-AP0C5M9 85 aa5.01□□□□□ -1.61
NUP57YGR119C RPL26AP05743 127 aaKnown RBP5□□□□□ -1.61
NUP57YGR119C UBC4P15731 148 aa5□□□□□ -1.61
NUP57YGR119C RPL26BP53221 127 aaKnown RBP5□□□□□ -1.61
NUP57YGR119C RSM19P53733 91 aaPredicted RBP5□□□□□ -1.61
NUP57YGR119C YDR115WQ04598 105 aa5□□□□□ -1.61
NUP57YGR119C TOM6P33448 61 aa4.99□□□□□ -1.61
NUP57YGR119C TSC3Q3E790 80 aa4.99□□□□□ -1.61
NUP57YGR119C YLR156WP0CE96 114 aa4.98□□□□□ -1.61
NUP57YGR119C YLR159WP0CE97 114 aa4.98□□□□□ -1.61
NUP57YGR119C YLR161WP0CE98 114 aa4.98□□□□□ -1.61
NUP57YGR119C SPC1P46965 94 aa4.98□□□□□ -1.61
NUP57YGR119C YER078W-AQ3E7A2 54 aa4.98□□□□□ -1.61
NUP57YGR119C YLL066W-BQ8TGJ7 56 aa4.97□□□□□ -1.61
NUP57YGR119C ECM12O13529 151 aa4.97□□□□□ -1.61
NUP57YGR119C FYV5P25585 152 aa4.97□□□□□ -1.61
NUP57YGR119C IGD1P43598 195 aa4.97□□□□□ -1.61
NUP57YGR119C YBR230W-AQ3E762 66 aa4.97□□□□□ -1.61
NUP57YGR119C RPL38P49167 78 aaKnown RBP4.96□□□□□ -1.62
NUP57YGR119C STF1P01098 86 aa4.95□□□□□ -1.62
NUP57YGR119C TDA2P40045 126 aa4.94□□□□□ -1.62
NUP57YGR119C YLR307C-AQ3E825 87 aa4.94□□□□□ -1.62
NUP57YGR119C YJL127C-BQ3E828 52 aa4.94□□□□□ -1.62
NUP57YGR119C RTC6O14464 93 aa4.93□□□□□ -1.62
NUP57YGR119C SFT1P43682 97 aa4.93□□□□□ -1.62
NUP57YGR119C RRT15Q3E811 62 aa4.93□□□□□ -1.62
NUP57YGR119C RSM18P40033 138 aa4.92□□□□□ -1.62
NUP57YGR119C YDR246W-AQ3E763 66 aa4.92□□□□□ -1.62
NUP57YGR119C YER187WP40102 141 aa4.91□□□□□ -1.62
NUP57YGR119C ICS3P47034 131 aa4.91□□□□□ -1.62
NUP57YGR119C YKL183C-AQ3E765 70 aa4.9□□□□□ -1.62
NUP57YGR119C YNL042W-BQ3E7Z2 85 aa4.9□□□□□ -1.62
NUP57YGR119C ATP20Q12233 115 aa4.9□□□□□ -1.63
NUP57YGR119C Q0032Q9ZZX7 96 aa4.9□□□□□ -1.63
NUP57YGR119C MDN1Q12019 4910 aaKnown RBP4.89□□□□□ -1.63
NUP57YGR119C BET1P22804 142 aa4.89□□□□□ -1.63
NUP57YGR119C COX23P38824 151 aa4.89□□□□□ -1.63
NUP57YGR119C YLR361C-AQ3E795 98 aa4.89□□□□□ -1.63
NUP57YGR119C YAR023CD6VPM8 179 aa4.88□□□□□ -1.63
NUP57YGR119C YOL014WQ08110 124 aa4.88□□□□□ -1.63
NUP57YGR119C HHF1P02309 103 aaKnown RBP4.87□□□□□ -1.63
NUP57YGR119C EDC2P40023 145 aaPredicted RBP4.87□□□□□ -1.63
NUP57YGR119C SNA2P56508 79 aa4.87□□□□□ -1.63
NUP57YGR119C YHR213W-BQ8TGK1 99 aa4.87□□□□□ -1.63
NUP57YGR119C YCR050CP25630 102 aa4.86□□□□□ -1.63
NUP57YGR119C YRA2P36036 203 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
NUP57YGR119C AIM4P38305 123 aaPredicted RBP4.86□□□□□ -1.63
NUP57YGR119C AUA1P32450 94 aa4.85□□□□□ -1.63
NUP57YGR119C YOR314WQ12506 109 aa4.85□□□□□ -1.63
NUP57YGR119C YER039C-AP0CD97 72 aa4.84□□□□□ -1.63
NUP57YGR119C YGL041C-BQ3E750 60 aa4.84□□□□□ -1.63
NUP57YGR119C YJL133C-AQ3E7A3 74 aa4.84□□□□□ -1.63
NUP57YGR119C SPT4P32914 102 aaPredicted RBP4.83□□□□□ -1.64
NUP57YGR119C NOP10Q6Q547 58 aaPredicted RBP4.83□□□□□ -1.64
NUP57YGR119C RPL36BO14455 100 aaKnown RBP4.82□□□□□ -1.64
NUP57YGR119C YGL193CP53097 103 aa4.8□□□□□ -1.64
NUP57YGR119C ECM19Q06011 112 aa4.8□□□□□ -1.64
NUP57YGR119C TDA8Q6B2U8 126 aa4.8□□□□□ -1.64
NUP57YGR119C PEX22P39718 180 aa4.79□□□□□ -1.64
NUP57YGR119C YJR085CP47131 105 aaKnown RBP4.79□□□□□ -1.64
NUP57YGR119C DDR2P89113 61 aa4.79□□□□□ -1.64
NUP57YGR119C YHR007C-AQ07074 71 aa4.79□□□□□ -1.64
NUP57YGR119C BSC4P53841 131 aa4.79□□□□□ -1.64
NUP57YGR119C YOR072WQ08486 104 aa4.79□□□□□ -1.64
NUP57YGR119C YDR182W-AQ3E796 67 aa4.78□□□□□ -1.64
NUP57YGR119C GIS2P53849 153 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
NUP57YGR119C YOL166W-AQ8TGJ1 51 aa4.77□□□□□ -1.65
NUP57YGR119C RPL36AP05745 100 aaPredicted RBP4.76□□□□□ -1.65
NUP57YGR119C YEL045CP32616 141 aa4.76□□□□□ -1.65
NUP57YGR119C SBH1P52870 82 aa4.75□□□□□ -1.65
NUP57YGR119C YLR162WQ06235 118 aa4.75□□□□□ -1.65
NUP57YGR119C MIC10Q96VH5 97 aa4.74□□□□□ -1.65
NUP57YGR119C YIL102CP40488 101 aa4.72□□□□□ -1.65
NUP57YGR119C LIP1Q03579 150 aa4.72□□□□□ -1.65
NUP57YGR119C YJL197C-AP0C5P0 93 aa4.71□□□□□ -1.66
NUP57YGR119C YDR034C-AP0C289 58 aa4.68□□□□□ -1.66
NUP57YGR119C YHL005CP38752 130 aa4.68□□□□□ -1.66
NUP57YGR119C YPR195CQ06594 109 aa4.67□□□□□ -1.66
NUP57YGR119C YGR121W-AQ3E816 71 aa4.67□□□□□ -1.66
NUP57YGR119C YOL013W-AP0C272 63 aaPredicted RBP4.66□□□□□ -1.66
NUP57YGR119C RPS30AP0CX33 63 aaKnown RBP4.66□□□□□ -1.66
NUP57YGR119C RPS30BP0CX34 63 aaKnown RBP4.66□□□□□ -1.66
NUP57YGR119C YAR064WP39563 99 aa4.66□□□□□ -1.66
NUP57YGR119C KSH1Q8TGJ3 72 aa4.65□□□□□ -1.66
NUP57YGR119C KTI11Q3E840 82 aa4.64□□□□□ -1.67
NUP57YGR119C YBR027CP38220 110 aa4.61□□□□□ -1.67
NUP57YGR119C SPG1P50088 95 aa4.61□□□□□ -1.67
NUP57YGR119C YGR164WP53291 111 aa4.61□□□□□ -1.67
NUP57YGR119C YLR412C-AQ3E742 68 aa4.59□□□□□ -1.67
NUP57YGR119C YBR121C-AP0C5L4 52 aa4.58□□□□□ -1.68
NUP57YGR119C YOR381W-AQ3E804 55 aa4.58□□□□□ -1.68
NUP57YGR119C YLR157W-DP0CE99 70 aa4.57□□□□□ -1.68
NUP57YGR119C YPR153WQ06537 140 aa4.57□□□□□ -1.68
NUP57YGR119C YOR268CQ08734 132 aa4.57□□□□□ -1.68
NUP57YGR119C YOL097W-AQ3E7Y9 61 aa4.57□□□□□ -1.68
NUP57YGR119C YHR125WP38831 101 aa4.57□□□□□ -1.68
NUP57YGR119C YDL012CQ12489 107 aa4.56□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms