RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W RPL39P04650 51 aa1.2□□□□□ -2.22
SIR4YDR227W YER188C-AP0C0V2 99 aa1.2□□□□□ -2.22
SIR4YDR227W DAD1Q12248 94 aa1.2□□□□□ -2.22
SIR4YDR227W YIL102C-AQ2V2P5 75 aa1.2□□□□□ -2.22
SIR4YDR227W YCR001WP25347 104 aa1.2□□□□□ -2.22
SIR4YDR227W EMC6Q12431 108 aa1.2□□□□□ -2.22
SIR4YDR227W YHR086W-AQ3E746 53 aa1.2□□□□□ -2.22
SIR4YDR227W MRPS9P38120 278 aa1.2□□□□□ -2.22
SIR4YDR227W TIM12P32830 109 aa1.19□□□□□ -2.22
SIR4YDR227W YGL010WP25338 174 aa1.19□□□□□ -2.22
SIR4YDR227W PAU24P38155 120 aa1.18□□□□□ -2.22
SIR4YDR227W LSM6Q06406 86 aaKnown RBP1.18□□□□□ -2.22
SIR4YDR227W YOL131WQ08270 108 aa1.18□□□□□ -2.22
SIR4YDR227W PCC1Q3E833 88 aa1.18□□□□□ -2.22
SIR4YDR227W PAU12P53343 120 aa1.18□□□□□ -2.22
SIR4YDR227W PMP3P87284 55 aa1.18□□□□□ -2.22
SIR4YDR227W YJL009WP47078 108 aa1.17□□□□□ -2.22
SIR4YDR227W COX23P38824 151 aa1.17□□□□□ -2.22
SIR4YDR227W RPL26AP05743 127 aaKnown RBP1.16□□□□□ -2.22
SIR4YDR227W PDX3P38075 228 aaKnown RBP1.16□□□□□ -2.22
SIR4YDR227W YMR030W-AQ3E760 96 aa1.16□□□□□ -2.22
SIR4YDR227W YML054C-AQ3E809 52 aa1.16□□□□□ -2.22
SIR4YDR227W YOL166W-AQ8TGJ1 51 aa1.16□□□□□ -2.22
SIR4YDR227W YBR292CP38357 123 aa1.16□□□□□ -2.22
SIR4YDR227W SEN15Q04675 128 aa1.16□□□□□ -2.22
SIR4YDR227W IRC21Q04772 201 aa1.16□□□□□ -2.22
SIR4YDR227W SEC11P15367 167 aa1.15□□□□□ -2.23
SIR4YDR227W PAU16P35994 123 aa1.15□□□□□ -2.23
SIR4YDR227W PRM7Q12459 698 aa1.14□□□□□ -2.23
SIR4YDR227W TDA2P40045 126 aa1.14□□□□□ -2.23
SIR4YDR227W TOM7P53507 60 aa1.14□□□□□ -2.23
SIR4YDR227W YOR268CQ08734 132 aa1.14□□□□□ -2.23
SIR4YDR227W CCW12Q12127 133 aa1.14□□□□□ -2.23
SIR4YDR227W PAU19P0CE85 124 aa1.14□□□□□ -2.23
SIR4YDR227W PAU3P25610 124 aa1.14□□□□□ -2.23
SIR4YDR227W CWP2P43497 92 aa1.14□□□□□ -2.23
SIR4YDR227W MRPS12P53732 153 aa1.14□□□□□ -2.23
SIR4YDR227W YJR146WP47174 117 aa1.13□□□□□ -2.23
SIR4YDR227W RPL33AP05744 107 aaKnown RBP1.13□□□□□ -2.23
SIR4YDR227W YHR173CP38864 112 aa1.13□□□□□ -2.23
SIR4YDR227W YOR381W-AQ3E804 55 aa1.13□□□□□ -2.23
SIR4YDR227W SSS1P35179 80 aa1.12□□□□□ -2.23
SIR4YDR227W QCR9P22289 66 aa1.12□□□□□ -2.23
SIR4YDR227W DSE2P38844 325 aa1.12□□□□□ -2.23
SIR4YDR227W YMR122CQ03879 124 aa1.11□□□□□ -2.23
SIR4YDR227W YGL258W-AQ3E740 77 aa1.11□□□□□ -2.23
SIR4YDR227W YLR255CO13574 117 aa1.11□□□□□ -2.23
SIR4YDR227W COX9P07255 59 aa1.11□□□□□ -2.23
SIR4YDR227W YGL014C-AP0C5N1 53 aa1.11□□□□□ -2.23
SIR4YDR227W MRPL31P14063 131 aaPredicted RBP1.1□□□□□ -2.23
SIR4YDR227W RPL37BP51402 88 aaKnown RBP1.1□□□□□ -2.23
SIR4YDR227W BSC4P53841 131 aa1.1□□□□□ -2.23
SIR4YDR227W YLL066W-BQ8TGJ7 56 aa1.1□□□□□ -2.23
SIR4YDR227W YMR122W-AQ3E842 84 aa1.1□□□□□ -2.23
SIR4YDR227W YBR298C-AQ8TGK4 73 aa1.1□□□□□ -2.23
SIR4YDR227W YBL071CP38185 102 aa1.1□□□□□ -2.23
SIR4YDR227W YIL163CP40448 117 aa1.1□□□□□ -2.23
SIR4YDR227W YLR194CQ05777 254 aa1.1□□□□□ -2.23
SIR4YDR227W YOR105WQ08504 108 aa1.1□□□□□ -2.23
SIR4YDR227W YIL134C-AQ45U18 67 aa1.1□□□□□ -2.23
SIR4YDR227W NHP2P32495 156 aaPredicted RBP1.09□□□□□ -2.24
SIR4YDR227W HMRA2P0CY13 119 aa1.08□□□□□ -2.24
SIR4YDR227W ATX1P38636 73 aa1.08□□□□□ -2.24
SIR4YDR227W YOR072WQ08486 104 aa1.08□□□□□ -2.24
SIR4YDR227W AIM4P38305 123 aaPredicted RBP1.08□□□□□ -2.24
SIR4YDR227W PAU5P43575 122 aa1.08□□□□□ -2.24
SIR4YDR227W YDL022C-AP0C5L6 82 aa1.07□□□□□ -2.24
SIR4YDR227W YMR230W-AQ3E7B5 62 aa1.07□□□□□ -2.24
SIR4YDR227W YAR064WP39563 99 aa1.07□□□□□ -2.24
SIR4YDR227W RPL26BP53221 127 aaKnown RBP1.07□□□□□ -2.24
SIR4YDR227W YDL012CQ12489 107 aa1.06□□□□□ -2.24
SIR4YDR227W SMX2P40204 77 aaKnown RBP1.06□□□□□ -2.24
SIR4YDR227W SNA2P56508 79 aa1.06□□□□□ -2.24
SIR4YDR227W YIL156W-BQ2V2P4 73 aa1.06□□□□□ -2.24
SIR4YDR227W RPC10P40422 70 aa1.05□□□□□ -2.24
SIR4YDR227W ATP17Q06405 101 aa1.05□□□□□ -2.24
SIR4YDR227W YCR095W-AQ3E787 52 aa1.05□□□□□ -2.24
SIR4YDR227W YOR192C-CQ3E736 78 aa1.05□□□□□ -2.24
SIR4YDR227W HPA2Q06592 156 aa1.04□□□□□ -2.24
SIR4YDR227W YSY6P38374 65 aa1.04□□□□□ -2.24
SIR4YDR227W Q0032Q9ZZX7 96 aa1.04□□□□□ -2.24
SIR4YDR227W YOL097W-AQ3E7Y9 61 aa1.03□□□□□ -2.24
SIR4YDR227W YNL042W-BQ3E7Z2 85 aa1.03□□□□□ -2.24
SIR4YDR227W NOP10Q6Q547 58 aaPredicted RBP1.03□□□□□ -2.24
SIR4YDR227W TAR1Q8TGM6 124 aa1.03□□□□□ -2.25
SIR4YDR227W YEL008WP40001 126 aa1.02□□□□□ -2.25
SIR4YDR227W AQY2P0CD90 149 aa1.02□□□□□ -2.25
SIR4YDR227W PAU6P0CE90 120 aa1.02□□□□□ -2.25
SIR4YDR227W PAU18P0CE91 120 aa1.02□□□□□ -2.25
SIR4YDR227W PAU8P0CE92 120 aa1.02□□□□□ -2.25
SIR4YDR227W PAU11P0CE93 120 aa1.02□□□□□ -2.25
SIR4YDR227W PAU13P38725 120 aa1.02□□□□□ -2.25
SIR4YDR227W PAU4P53427 120 aa1.02□□□□□ -2.25
SIR4YDR227W PAU10Q03050 120 aa1.02□□□□□ -2.25
SIR4YDR227W PAU9Q3E770 120 aa1.02□□□□□ -2.25
SIR4YDR227W YOL085CQ99345 113 aa1.02□□□□□ -2.25
SIR4YDR227W EDC1P53080 175 aaPredicted RBP1.02□□□□□ -2.25
SIR4YDR227W MGR2Q02889 113 aa1.01□□□□□ -2.25
SIR4YDR227W YOR011W-AQ3E807 68 aa1.01□□□□□ -2.25
SIR4YDR227W YLR342W-AQ3E810 57 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms