RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C MPC3P53311 146 aa1.48□□□□□ -2.17
BRE1YDL074C YBR230W-AQ3E762 66 aa1.48□□□□□ -2.17
BRE1YDL074C YKL183C-AQ3E765 70 aa1.48□□□□□ -2.17
BRE1YDL074C YNL162W-AQ3E7A8 72 aa1.48□□□□□ -2.17
BRE1YDL074C YBR182C-AQ8TGU6 64 aa1.48□□□□□ -2.17
BRE1YDL074C YBL081WP38180 368 aaKnown RBP1.48□□□□□ -2.17
BRE1YDL074C AUA1P32450 94 aa1.47□□□□□ -2.17
BRE1YDL074C YRA2P36036 203 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
BRE1YDL074C YGR039WP53225 103 aa1.47□□□□□ -2.17
BRE1YDL074C YOR034C-AQ3E735 80 aa1.47□□□□□ -2.17
BRE1YDL074C YLR307C-AQ3E825 87 aa1.47□□□□□ -2.17
BRE1YDL074C SMP1P38128 452 aa1.46□□□□□ -2.18
BRE1YDL074C EDC2P40023 145 aaPredicted RBP1.46□□□□□ -2.18
BRE1YDL074C YGL193CP53097 103 aa1.46□□□□□ -2.18
BRE1YDL074C DDR2P89113 61 aa1.46□□□□□ -2.18
BRE1YDL074C RRT15Q3E811 62 aa1.46□□□□□ -2.18
BRE1YDL074C UTP20P35194 2493 aaKnown RBP1.46□□□□□ -2.18
BRE1YDL074C YDR034C-AP0C289 58 aa1.46□□□□□ -2.18
BRE1YDL074C YFR009W-AP0C5M9 85 aa1.46□□□□□ -2.18
BRE1YDL074C COX23P38824 151 aa1.46□□□□□ -2.18
BRE1YDL074C RPL38P49167 78 aaKnown RBP1.46□□□□□ -2.18
BRE1YDL074C ATP20Q12233 115 aa1.46□□□□□ -2.18
BRE1YDL074C YLR285C-AQ3E771 56 aa1.46□□□□□ -2.18
BRE1YDL074C RPL36BO14455 100 aaKnown RBP1.45□□□□□ -2.18
BRE1YDL074C YCR050CP25630 102 aa1.45□□□□□ -2.18
BRE1YDL074C PEX22P39718 180 aa1.45□□□□□ -2.18
BRE1YDL074C GAT4P40569 121 aa1.45□□□□□ -2.18
BRE1YDL074C IGD1P43598 195 aa1.45□□□□□ -2.18
BRE1YDL074C ICS3P47034 131 aa1.45□□□□□ -2.18
BRE1YDL074C YOR072WQ08486 104 aa1.45□□□□□ -2.18
BRE1YDL074C YPL038W-AQ3E7B4 63 aa1.45□□□□□ -2.18
BRE1YDL074C TOM6P33448 61 aa1.45□□□□□ -2.18
BRE1YDL074C HOT13P36078 116 aa1.45□□□□□ -2.18
BRE1YDL074C SPG1P50088 95 aa1.45□□□□□ -2.18
BRE1YDL074C YOR314WQ12506 109 aa1.45□□□□□ -2.18
BRE1YDL074C YGR121W-AQ3E816 71 aa1.45□□□□□ -2.18
BRE1YDL074C YLR415CO13578 112 aa1.44□□□□□ -2.18
BRE1YDL074C RSM18P40033 138 aa1.44□□□□□ -2.18
BRE1YDL074C BSC4P53841 131 aa1.44□□□□□ -2.18
BRE1YDL074C LCL1Q02786 101 aa1.44□□□□□ -2.18
BRE1YDL074C YJL133C-AQ3E7A3 74 aa1.44□□□□□ -2.18
BRE1YDL074C TDA8Q6B2U8 126 aa1.44□□□□□ -2.18
BRE1YDL074C YHR213W-BQ8TGK1 99 aa1.44□□□□□ -2.18
BRE1YDL074C YLR156WP0CE96 114 aa1.43□□□□□ -2.18
BRE1YDL074C YLR159WP0CE97 114 aa1.43□□□□□ -2.18
BRE1YDL074C YLR161WP0CE98 114 aa1.43□□□□□ -2.18
BRE1YDL074C YNL184CP53876 108 aa1.43□□□□□ -2.18
BRE1YDL074C YDR119W-AQ2V2P9 66 aa1.43□□□□□ -2.18
BRE1YDL074C YLR157W-DP0CE99 70 aa1.43□□□□□ -2.18
BRE1YDL074C YHL018WP38744 120 aaPredicted RBP1.43□□□□□ -2.18
BRE1YDL074C ECM19Q06011 112 aa1.43□□□□□ -2.18
BRE1YDL074C YHR007C-AQ07074 71 aa1.43□□□□□ -2.18
BRE1YDL074C YIR021W-AQ3E739 70 aa1.43□□□□□ -2.18
BRE1YDL074C YJR085CP47131 105 aaKnown RBP1.42□□□□□ -2.18
BRE1YDL074C YLR162WQ06235 118 aa1.42□□□□□ -2.18
BRE1YDL074C AIM4P38305 123 aaPredicted RBP1.42□□□□□ -2.18
BRE1YDL074C YDR182W-AQ3E796 67 aa1.42□□□□□ -2.18
BRE1YDL074C YBL112CQ3E7Y4 105 aa1.42□□□□□ -2.18
BRE1YDL074C DYN1P36022 4092 aa1.41□□□□□ -2.18
BRE1YDL074C YER187WP40102 141 aa1.41□□□□□ -2.18
BRE1YDL074C EDC1P53080 175 aaPredicted RBP1.41□□□□□ -2.18
BRE1YDL074C YOL097W-AQ3E7Y9 61 aa1.41□□□□□ -2.18
BRE1YDL074C MIC10Q96VH5 97 aa1.41□□□□□ -2.18
BRE1YDL074C RPL36AP05745 100 aaPredicted RBP1.4□□□□□ -2.19
BRE1YDL074C YEL045CP32616 141 aa1.4□□□□□ -2.19
BRE1YDL074C MMS2P53152 137 aa1.4□□□□□ -2.19
BRE1YDL074C GIS2P53849 153 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
BRE1YDL074C YPR195CQ06594 109 aa1.4□□□□□ -2.19
BRE1YDL074C YIL102CP40488 101 aa1.39□□□□□ -2.19
BRE1YDL074C YAR064WP39563 99 aa1.39□□□□□ -2.19
BRE1YDL074C LCL2Q08045 131 aa1.39□□□□□ -2.19
BRE1YDL074C YOL014WQ08110 124 aa1.39□□□□□ -2.19
BRE1YDL074C YKL069WP36088 180 aa1.38□□□□□ -2.19
BRE1YDL074C YPL080CQ02826 108 aa1.38□□□□□ -2.19
BRE1YDL074C LIP1Q03579 150 aa1.38□□□□□ -2.19
BRE1YDL074C YOR268CQ08734 132 aa1.38□□□□□ -2.19
BRE1YDL074C NOP10Q6Q547 58 aaPredicted RBP1.38□□□□□ -2.19
BRE1YDL074C KSH1Q8TGJ3 72 aa1.38□□□□□ -2.19
BRE1YDL074C YJL197C-AP0C5P0 93 aa1.37□□□□□ -2.19
BRE1YDL074C YCR043CP25361 127 aa1.37□□□□□ -2.19
BRE1YDL074C YGL149WP53116 101 aa1.37□□□□□ -2.19
BRE1YDL074C KTI11Q3E840 82 aa1.37□□□□□ -2.19
BRE1YDL074C YOL013W-AP0C272 63 aaPredicted RBP1.37□□□□□ -2.19
BRE1YDL074C YBR027CP38220 110 aa1.37□□□□□ -2.19
BRE1YDL074C HUB1Q6Q546 73 aa1.37□□□□□ -2.19
BRE1YDL074C YHR073W-AP0C5N7 58 aa1.36□□□□□ -2.19
BRE1YDL074C COX7P10174 60 aa1.36□□□□□ -2.19
BRE1YDL074C YPR153WQ06537 140 aa1.36□□□□□ -2.19
BRE1YDL074C YDR246W-AQ3E763 66 aa1.36□□□□□ -2.19
BRE1YDL074C YHL005CP38752 130 aa1.36□□□□□ -2.19
BRE1YDL074C SBH1P52870 82 aa1.36□□□□□ -2.19
BRE1YDL074C YKL065W-AQ2V2P2 73 aa1.36□□□□□ -2.19
BRE1YDL074C SDH6Q3E785 79 aa1.36□□□□□ -2.19
BRE1YDL074C YOL166W-AQ8TGJ1 51 aa1.36□□□□□ -2.19
BRE1YDL074C HHF1P02309 103 aaKnown RBP1.35□□□□□ -2.19
BRE1YDL074C YMR230W-AQ3E7B5 62 aa1.35□□□□□ -2.19
BRE1YDL074C YLR361C-AQ3E795 98 aa1.34□□□□□ -2.19
BRE1YDL074C RPS30AP0CX33 63 aaKnown RBP1.34□□□□□ -2.2
BRE1YDL074C RPS30BP0CX34 63 aaKnown RBP1.34□□□□□ -2.2
BRE1YDL074C YHR125WP38831 101 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms