RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C YLR363W-AQ3E747 85 aa9.12□□□□□ -0.95
SSA1YAL005C DDR48P18899 430 aaKnown RBP9.11□□□□□ -0.95
SSA1YAL005C YDR034C-AP0C289 58 aa9.11□□□□□ -0.95
SSA1YAL005C LCL2Q08045 131 aa9.09□□□□□ -0.95
SSA1YAL005C RSM19P53733 91 aaPredicted RBP9.09□□□□□ -0.95
SSA1YAL005C EMC6Q12431 108 aa9.09□□□□□ -0.95
SSA1YAL005C AQY2P0CD90 149 aa9.07□□□□□ -0.96
SSA1YAL005C YLR296WQ05898 108 aa9.07□□□□□ -0.96
SSA1YAL005C YLL006W-AQ3E814 58 aa9.07□□□□□ -0.96
SSA1YAL005C YFL041W-AQ3E817 63 aa9.07□□□□□ -0.96
SSA1YAL005C YFL019CP43576 117 aa9.06□□□□□ -0.96
SSA1YAL005C SPG1P50088 95 aa9.06□□□□□ -0.96
SSA1YAL005C YAL063C-AQ3E791 96 aa9.06□□□□□ -0.96
SSA1YAL005C YML100W-AQ8TGT0 57 aa9.06□□□□□ -0.96
SSA1YAL005C BET1P22804 142 aa9.05□□□□□ -0.96
SSA1YAL005C EDC2P40023 145 aaPredicted RBP9.05□□□□□ -0.96
SSA1YAL005C YOL014WQ08110 124 aa9.05□□□□□ -0.96
SSA1YAL005C MVB12P42939 101 aa9.04□□□□□ -0.96
SSA1YAL005C TDA2P40045 126 aa9.03□□□□□ -0.96
SSA1YAL005C YML079WQ03629 201 aa9.01□□□□□ -0.97
SSA1YAL005C NHP2P32495 156 aaPredicted RBP9.01□□□□□ -0.97
SSA1YAL005C YBL008W-AQ3E821 79 aa9□□□□□ -0.97
SSA1YAL005C HPA2Q06592 156 aa8.99□□□□□ -0.97
SSA1YAL005C YEL045CP32616 141 aa8.98□□□□□ -0.97
SSA1YAL005C YBL039W-BP0C268 59 aa8.97□□□□□ -0.97
SSA1YAL005C YHL042WP38729 150 aa8.97□□□□□ -0.97
SSA1YAL005C IGD1P43598 195 aa8.97□□□□□ -0.97
SSA1YAL005C RGM1Q00453 211 aa8.95□□□□□ -0.98
SSA1YAL005C YPL038W-AQ3E7B4 63 aa8.94□□□□□ -0.98
SSA1YAL005C RPL29P05747 59 aaPredicted RBP8.93□□□□□ -0.98
SSA1YAL005C AIM19P40502 157 aa8.93□□□□□ -0.98
SSA1YAL005C FYV12Q08559 129 aa8.93□□□□□ -0.98
SSA1YAL005C HUR1P45820 110 aa8.92□□□□□ -0.98
SSA1YAL005C YGL041C-BQ3E750 60 aa8.92□□□□□ -0.98
SSA1YAL005C Q0032Q9ZZX7 96 aa8.92□□□□□ -0.98
SSA1YAL005C YDR381C-AQ3E6R5 114 aa8.92□□□□□ -0.98
SSA1YAL005C YOR020W-AQ3E824 90 aa8.92□□□□□ -0.98
SSA1YAL005C YKL023C-AQ2V2P3 75 aa8.91□□□□□ -0.98
SSA1YAL005C ICY1Q04329 127 aa8.89□□□□□ -0.99
SSA1YAL005C YNL162W-AQ3E7A8 72 aa8.88□□□□□ -0.99
SSA1YAL005C YLR307C-AQ3E825 87 aa8.88□□□□□ -0.99
SSA1YAL005C GIS2P53849 153 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
SSA1YAL005C IRC21Q04772 201 aa8.86□□□□□ -0.99
SSA1YAL005C YOR268CQ08734 132 aa8.86□□□□□ -0.99
SSA1YAL005C LSM6Q06406 86 aaKnown RBP8.86□□□□□ -0.99
SSA1YAL005C YOR034C-AQ3E735 80 aa8.85□□□□□ -0.99
SSA1YAL005C RSM18P40033 138 aa8.84□□□□□ -0.99
SSA1YAL005C FYV5P25585 152 aa8.84□□□□□ -1
SSA1YAL005C ICS3P47034 131 aa8.83□□□□□ -1
SSA1YAL005C YLR156WP0CE96 114 aa8.81□□□□□ -1
SSA1YAL005C YLR159WP0CE97 114 aa8.81□□□□□ -1
SSA1YAL005C YLR161WP0CE98 114 aa8.81□□□□□ -1
SSA1YAL005C LCL1Q02786 101 aa8.8□□□□□ -1
SSA1YAL005C MET32Q12041 191 aa8.8□□□□□ -1
SSA1YAL005C MSA2P36157 363 aa8.78□□□□□ -1
SSA1YAL005C QCR10P37299 77 aa8.78□□□□□ -1
SSA1YAL005C YER187WP40102 141 aa8.78□□□□□ -1
SSA1YAL005C ATP20Q12233 115 aa8.76□□□□□ -1.01
SSA1YAL005C RPL26AP05743 127 aaKnown RBP8.75□□□□□ -1.01
SSA1YAL005C RPL26BP53221 127 aaKnown RBP8.75□□□□□ -1.01
SSA1YAL005C LIP1Q03579 150 aa8.74□□□□□ -1.01
SSA1YAL005C YBR230W-AQ3E762 66 aa8.72□□□□□ -1.01
SSA1YAL005C YLR236CA0A023PZG4 107 aa8.71□□□□□ -1.02
SSA1YAL005C YHL005CP38752 130 aa8.71□□□□□ -1.02
SSA1YAL005C YNL042W-BQ3E7Z2 85 aa8.7□□□□□ -1.02
SSA1YAL005C HHF1P02309 103 aaKnown RBP8.7□□□□□ -1.02
SSA1YAL005C YJL127C-BQ3E828 52 aa8.7□□□□□ -1.02
SSA1YAL005C SAP30P38429 201 aa8.69□□□□□ -1.02
SSA1YAL005C SOM1Q05676 74 aa8.69□□□□□ -1.02
SSA1YAL005C MPC3P53311 146 aa8.66□□□□□ -1.02
SSA1YAL005C YCR043CP25361 127 aa8.64□□□□□ -1.03
SSA1YAL005C DDR2P89113 61 aa8.64□□□□□ -1.03
SSA1YAL005C YOR381W-AQ3E804 55 aa8.6□□□□□ -1.03
SSA1YAL005C DSE2P38844 325 aa8.57□□□□□ -1.04
SSA1YAL005C BSC4P53841 131 aa8.56□□□□□ -1.04
SSA1YAL005C OST5Q92316 86 aa8.56□□□□□ -1.04
SSA1YAL005C YSY6P38374 65 aa8.54□□□□□ -1.04
SSA1YAL005C YHR007C-AQ07074 71 aa8.54□□□□□ -1.04
SSA1YAL005C YFL067WP43537 175 aa8.53□□□□□ -1.04
SSA1YAL005C YOR314WQ12506 109 aa8.52□□□□□ -1.05
SSA1YAL005C YJR107C-AP0CT86 78 aa8.51□□□□□ -1.05
SSA1YAL005C YGR121W-AQ3E816 71 aa8.51□□□□□ -1.05
SSA1YAL005C YGL149WP53116 101 aa8.47□□□□□ -1.05
SSA1YAL005C YOR072WQ08486 104 aa8.47□□□□□ -1.05
SSA1YAL005C YDR246W-AQ3E763 66 aa8.47□□□□□ -1.05
SSA1YAL005C YMR230W-AQ3E7B5 62 aa8.46□□□□□ -1.06
SSA1YAL005C RPL36BO14455 100 aaKnown RBP8.45□□□□□ -1.06
SSA1YAL005C YJR085CP47131 105 aaKnown RBP8.44□□□□□ -1.06
SSA1YAL005C YLR162WQ06235 118 aa8.42□□□□□ -1.06
SSA1YAL005C ATP18P81450 59 aa8.42□□□□□ -1.06
SSA1YAL005C YER188C-AP0C0V2 99 aa8.41□□□□□ -1.06
SSA1YAL005C AIM4P38305 123 aaPredicted RBP8.41□□□□□ -1.06
SSA1YAL005C YFR009W-AP0C5M9 85 aa8.4□□□□□ -1.06
SSA1YAL005C YKL065W-AQ2V2P2 73 aa8.38□□□□□ -1.07
SSA1YAL005C YDR010CQ12426 110 aa8.37□□□□□ -1.07
SSA1YAL005C YBR027CP38220 110 aa8.36□□□□□ -1.07
SSA1YAL005C YMR122CQ03879 124 aa8.35□□□□□ -1.07
SSA1YAL005C COX23P38824 151 aa8.34□□□□□ -1.07
SSA1YAL005C YER078W-AQ3E7A2 54 aa8.33□□□□□ -1.08
SSA1YAL005C RPL36AP05745 100 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms