RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 NFS1Q9Y697 457 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 CXCL10P02778 98 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 TMEM253P0C7T8 217 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 CREMQ03060 361 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 BST2Q10589 180 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 KRT81Q14533 505 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 LLGL1Q15334 1064 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 DDR2Q16832 855 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZNF677Q86XU0 584 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 PHOSPHO2Q8TCD6 241 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 PLEKHA4Q9H4M7 779 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 STAP1Q9ULZ2 295 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 PCNTO95613 3336 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 PMM2O15305 246 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 BUB1BO60566 1050 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 IGHA2P01877 340 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 IVLP07476 585 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 PAEPP09466 180 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 KRT3P12035 628 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 UPP1Q16831 310 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 SOWAHAQ2M3V2 549 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 MRPS31Q92665 395 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 PER2O15055 1255 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 DGKIO75912 1065 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 CKMP06732 381 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 ACADSBP45954 432 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 TKTL1P51854 596 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 HADHBP55084 474 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 UAP1Q16222 522 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 ALS2CLQ60I27 953 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 SLC35G2Q8TBE7 412 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 SHC3Q92529 594 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 C17orf80Q9BSJ5 609 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 STMN4Q9H169 189 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 F8W810 466 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 ATMINO43313 823 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 MICAL2O94851 1124 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 BMPR1AP36894 532 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 C10orf120Q5SQS8 335 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 CCDC149Q6ZUS6 474 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 ISCUQ9H1K1 167 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 CXCL16Q9H2A7 254 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 TLR9Q9NR96 1032 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 FAM114A2Q9NRY5 505 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 MYBPHLA2RUH7 354 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 XYLBO75191 536 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 RTN2O75298 545 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 CHRNB2P17787 502 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 PLD1Q13393 1074 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 DCAF6Q58WW2 860 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 MIB1Q86YT6 1006 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 TDHQ8IZJ6 230 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 LINC01599Q8WXQ3 324 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 DPEP3Q9H4B8 488 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 TRPM5Q9NZQ8 1165 aa13.05□□□□□ -0.32
SYNGAP1-207ENST00000628646 ITGB1P05556 798 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 IRF1P10914 325 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 LRPAP1P30533 357 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 FAM43BQ6ZT52 329 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 ITIH5Q86UX2 942 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 NUP85Q9BW27 656 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 THAP2Q9H0W7 228 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 PRRC2BQ5JSZ5 2229 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 PRPSAP2O60256 369 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 NCAM1P13591 858 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 CYP2F1P24903 491 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 ADIGQ0VDE8 80 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 PPP1R7Q15435 360 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 CES5AQ6NT32 575 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 CORO1BQ9BR76 489 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 FAM107BQ9H098 131 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 PCSK1NQ9UHG2 260 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 COQ4Q9Y3A0 265 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 SCN10AQ9Y5Y9 1956 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 TYW5A2RUC4 315 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 GOLGA8KD6RF30 607 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 KRT14P02533 472 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 SETSIPP0DME0 302 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 TYMPP19971 482 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZDHHC14Q8IZN3 488 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 HERVK_113Q902F9 699 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 LPIN3Q9BQK8 851 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 SIK2Q9H0K1 926 aa13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 NOCTQ9UK39 431 aaKnown RBP13.04□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZNF236Q9UL36 1845 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms