RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 DAAM2Q86T65 1068 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 MSANTD4Q8NCY6 345 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 C3orf20Q8ND61 904 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 STK32AQ8WU08 396 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 MYCBPQ99417 103 aaPredicted RBP17.1■□□□□ 0.33
SNAP47-213ENST00000617596 SELENOOQ9BVL4 669 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 PARD6BQ9BYG5 372 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 ZBP1Q9H171 429 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 CSNK1G1Q9HCP0 422 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 DMAP1Q9NPF5 467 aaPredicted RBP17.1■□□□□ 0.33
SNAP47-213ENST00000617596 MRPL17Q9NRX2 175 aaKnown RBP17.1■□□□□ 0.33
SNAP47-213ENST00000617596 STRIP2Q9ULQ0 834 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 ERLIN1O75477 346 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
SNAP47-213ENST00000617596 ADCY1Q08828 1119 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 DUSP4Q13115 394 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 CFAP221Q4G0U5 840 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 SWT1Q5T5J6 900 aaKnown RBP17.09■□□□□ 0.33
SNAP47-213ENST00000617596 DCUN1D2Q6PH85 259 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 OLFML1Q6UWY5 402 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 LRRC57Q8N9N7 239 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 TRIM58Q8NG06 486 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 SCAMP5Q8TAC9 235 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 MCRS1Q96EZ8 462 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 HSFY1Q96LI6 401 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 ALS2CR12Q96Q35 445 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 SEPT5Q99719 369 aaPredicted RBP17.09■□□□□ 0.33
SNAP47-213ENST00000617596 PBX4Q9BYU1 374 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 LRRC4Q9HBW1 653 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 UVRAGQ9P2Y5 699 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 LCMT1Q9UIC8 334 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 BACE2Q9Y5Z0 518 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 MYH10P35580 1976 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
SNAP47-213ENST00000617596 KRT3P12035 628 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 RPL34P49207 117 aaKnown RBP17.09■□□□□ 0.33
SNAP47-213ENST00000617596 LMAN1P49257 510 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 TKTL1P51854 596 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 OGDHQ02218 1023 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
SNAP47-213ENST00000617596 MGAT5BQ3V5L5 792 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 PPP1R15BQ5SWA1 713 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 FEZF2Q8TBJ5 459 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 MRPL47Q9HD33 250 aaKnown RBP17.09■□□□□ 0.33
SNAP47-213ENST00000617596 SCINQ9Y6U3 715 aa17.09■□□□□ 0.33
SNAP47-213ENST00000617596 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 TRIM66O15016 1216 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 TEX28O15482 410 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 CORO7P57737 925 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 TCEAL1Q15170 157 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 POF1BQ8WVV4 589 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 TCF25Q9BQ70 676 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 JRKLQ9Y4A0 524 aa17.08■□□□□ 0.33
SNAP47-213ENST00000617596 CARNS1A5YM72 827 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 TMEM191CA6NGB0 347 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 LILRB3O75022 631 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 MTA2O94776 668 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 USP17L7P0C7H9 530 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 SPATA31D3P0C874 917 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 CTSAP10619 480 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 TAP1Q03518 808 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 ZNF252P-AS1Q0IIN9 211 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 IFI16Q16666 785 aaKnown RBP17.08■□□□□ 0.32
SNAP47-213ENST00000617596 TRNP1Q6NT89 227 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 SPATA31D4Q6ZUB0 917 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 CEP112Q8N8E3 955 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 SPPL3Q8TCT6 385 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 KCTD13Q8WZ19 329 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 KHSRPQ92945 711 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNAP47-213ENST00000617596 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNAP47-213ENST00000617596 PSMB7Q99436 277 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 ULBP1Q9BZM6 244 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 ACBD3Q9H3P7 528 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 MED4Q9NPJ6 270 aa17.08■□□□□ 0.32
SNAP47-213ENST00000617596 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.07■□□□□ 0.32
SNAP47-213ENST00000617596 SIGLEC16A6NMB1 481 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 HIDE1A8MVS5 230 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 GRM6O15303 877 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 SEC24AO95486 1093 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 CXCL14O95715 111 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 CNPP09543 421 aaKnown RBP17.07■□□□□ 0.32
SNAP47-213ENST00000617596 FLT3P36888 993 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 ACADSBP45954 432 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 SLC5A3P53794 718 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 HADHBP55084 474 aaKnown RBP17.07■□□□□ 0.32
SNAP47-213ENST00000617596 SLC6A3Q01959 620 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 RAB41Q5JT25 222 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 PLPP4Q5VZY2 271 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 FAM71BQ8TC56 605 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 ENTPD7Q9NQZ7 604 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 WDR35Q9P2L0 1181 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 PCDHA11Q9Y5I1 949 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 ALG6Q9Y672 507 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
SNAP47-213ENST00000617596 MYO1FO00160 1098 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 COMTP21964 271 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms