RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 SF3A3Q12874 501 aaKnown RBP eCLIP5.59□□□□□ -1.51
RFC3-203ENST00000616236 MPP3Q13368 585 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 MAMLD1Q13495 774 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 TDGQ13569 410 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 FHL3Q13643 280 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 NFIXQ14938 502 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 NFIL3Q16649 462 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 PTCHD3Q3KNS1 767 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 SLC22A25Q6T423 547 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 SLC30A10Q6XR72 485 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 GET4Q7L5D6 327 aaPredicted RBP5.59□□□□□ -1.51
RFC3-203ENST00000616236 RASGRP2Q7LDG7 609 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 PXKQ7Z7A4 578 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 LINS1Q8NG48 757 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 DNAJB14Q8TBM8 379 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 KTI12Q96EK9 354 aaPredicted RBP5.59□□□□□ -1.51
RFC3-203ENST00000616236 MCRS1Q96EZ8 462 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 KIRREL1Q96J84 757 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 GPHA2Q96T91 129 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 YME1L1Q96TA2 773 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 FUZQ9BT04 418 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 MXD3Q9BW11 206 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 TLR10Q9BXR5 811 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 ZNF552Q9H707 407 aaPredicted RBP5.59□□□□□ -1.51
RFC3-203ENST00000616236 SYNCQ9H7C4 482 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 PLA2G3Q9NZ20 509 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 FAM30AQ9NZY2 134 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 MRPS17Q9Y2R5 130 aaKnown RBP5.59□□□□□ -1.51
RFC3-203ENST00000616236 PCDHA5Q9Y5H7 936 aa5.59□□□□□ -1.51
RFC3-203ENST00000616236 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 SAC3D1A6NKF1 404 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 TBKBP1A7MCY6 615 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 B5MCH6 92 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 H7C0S8 307 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 POLRMTO00411 1230 aaKnown RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 CLEC3BP05452 202 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 CLTBP09497 229 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ATXN1LP0C7T5 689 aaKnown RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 UBL4AP11441 157 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 LAMP2P13473 410 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 HGFP14210 728 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 KCNA3P22001 575 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 YY1P25490 414 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 NTSR1P30989 418 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ZEB1P37275 1124 aaPredicted RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 RGS2P41220 211 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 DGKEP52429 567 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ZNF134P52741 427 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 MC1RQ01726 317 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 SATB1Q01826 763 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 CDC16Q13042 620 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ACVR2BQ13705 512 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 CSHL1Q14406 222 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 CDC37Q16543 378 aaPredicted RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 TBR1Q16650 682 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 BMT2Q1RMZ1 405 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ZNF792Q3KQV3 632 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 NRN1LQ496H8 165 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 PRR31Q5SQ13 230 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ATXN7L2Q5T6C5 722 aaPredicted RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 NAA35Q5VZE5 725 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 RINLQ6ZS11 566 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 Q6ZUG5 572 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 USP30Q70CQ3 517 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 KRT74Q7RTS7 529 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ADGRE4PQ86SQ3 457 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 TRABD2AQ86V40 505 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 SNX32Q86XE0 403 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 DTX1Q86Y01 620 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 XYLT1Q86Y38 959 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 RPAP2Q8IXW5 612 aaPredicted RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 TEX11Q8IYF3 940 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 TMEFF1Q8IYR6 380 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 CNPY4Q8N129 248 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ADSSL1Q8N142 457 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 TTC39CQ8N584 583 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 FAM71DQ8N9W8 422 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 SSH3Q8TE77 659 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 FNIP1Q8TF40 1166 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 SLC22A17Q8WUG5 538 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 USP6NLQ92738 828 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 ATP2A3Q93084 1043 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 RBM17Q96I25 401 aaKnown RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 NUDT22Q9BRQ3 303 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 PHF7Q9BWX1 381 aaPredicted RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 SLC25A18Q9H1K4 315 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 EPC1Q9H2F5 836 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 BRF2Q9HAW0 419 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 PLEKHA2Q9HB19 425 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 DIAPH3Q9NSV4 1193 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 LIN7CQ9NUP9 197 aaKnown RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 STK17AQ9UEE5 414 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 VPS51Q9UID3 782 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 CNOT7Q9UIV1 285 aaKnown RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 ZNF215Q9UL58 517 aaPredicted RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 ANGEL1Q9UNK9 670 aaKnown RBP5.58□□□□□ -1.52
RFC3-203ENST00000616236 USP22Q9UPT9 525 aa5.58□□□□□ -1.52
RFC3-203ENST00000616236 PEX12O00623 359 aa5.57□□□□□ -1.52
RFC3-203ENST00000616236 TNPO2O14787 897 aaKnown RBP5.57□□□□□ -1.52
RFC3-203ENST00000616236 CD3EAPO15446 510 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms