RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 SLC8A3P57103 927 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 MCRS1Q96EZ8 462 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 STK33Q9BYT3 514 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 COMMD8Q9NX08 183 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 AIPL1Q9NZN9 384 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.26■□□□□ 0.99
ATG4D-208ENST00000588667 TADA3O75528 432 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 CCDC175P0C221 793 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 BRD2P25440 801 aaKnown RBP21.25■□□□□ 0.99
ATG4D-208ENST00000588667 CYLC1P35663 651 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-208ENST00000588667 USP8P40818 1118 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 MTF1Q14872 753 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 DRAP1Q14919 205 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-208ENST00000588667 CNGA2Q16280 664 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 ASIC2Q16515 512 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 LCLAT1Q6UWP7 414 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 TOGARAM2Q6ZUX3 1019 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 TTC30AQ86WT1 665 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 RNF135Q8IUD6 432 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 ZSWIM1Q9BR11 485 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 SLITRK6Q9H5Y7 841 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 NHEJ1Q9H9Q4 299 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-208ENST00000588667 IL37Q9NZH6 218 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 LIMD1Q9UGP4 676 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 ZMYM5Q9UJ78 669 aa21.25■□□□□ 0.99
ATG4D-208ENST00000588667 HHLA1C9JL84 531 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 SERPING1P05155 500 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 YWHAQP27348 245 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 GNA15P30679 374 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 JAM2P57087 298 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 CYP4F8P98187 520 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 BST2Q10589 180 aaKnown RBP21.24■□□□□ 0.99
ATG4D-208ENST00000588667 POTEHQ6S545 545 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 MTSS1LQ765P7 747 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 FAM71AQ8IYT1 594 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 MRPS31Q92665 395 aaKnown RBP21.24■□□□□ 0.99
ATG4D-208ENST00000588667 CCDC42Q96M95 316 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 SLITRK1Q96PX8 696 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 TRMT1Q9NXH9 659 aaKnown RBP21.24■□□□□ 0.99
ATG4D-208ENST00000588667 IGSF9Q9P2J2 1179 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 PPP2R2CQ9Y2T4 447 aa21.24■□□□□ 0.99
ATG4D-208ENST00000588667 EPN1Q9Y6I3 576 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-208ENST00000588667 FAM92AA1XBS5 289 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 GOLGA6L9A6NEM1 432 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 ANHXE9PGG2 379 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 FOXN3O00409 490 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-208ENST00000588667 NDUFA10O95299 355 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 IPO7O95373 1038 aaKnown RBP21.23■□□□□ 0.99
ATG4D-208ENST00000588667 SETSIPP0DME0 302 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 DDX6P26196 483 aaKnown RBP eCLIP21.23■□□□□ 0.997e-8■■□□□ 12.4
ATG4D-208ENST00000588667 CLCN1P35523 988 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 STAT1P42224 750 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 PPP3CCP48454 512 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 IFRD2Q12894 506 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-208ENST00000588667 PKDCCQ504Y2 493 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 STXBP5Q5T5C0 1151 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 GPR158Q5T848 1215 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 SCAMP5Q8TAC9 235 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 NXPE3Q969Y0 559 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 UBXN6Q9BZV1 441 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 FBXO44Q9H4M3 255 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 TASP1Q9H6P5 420 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 ADGRG1Q9Y653 693 aa21.23■□□□□ 0.99
ATG4D-208ENST00000588667 BZW2Q9Y6E2 419 aaKnown RBP21.23■□□□□ 0.99
ATG4D-208ENST00000588667 SSU72P8A0A1W2PR75 194 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 SOBPA7XYQ1 873 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 F8VZ95 297 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 XPO1O14980 1071 aaKnown RBP21.22■□□□□ 0.99
ATG4D-208ENST00000588667 MED7O43513 233 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 CALCAP01258 141 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 CCDC172P0C7W6 258 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 PDE4CQ08493 712 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 TAF10Q12962 218 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 HTR4Q13639 388 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 GPRIN1Q7Z2K8 1008 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 PDZD8Q8NEN9 1154 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 OVCA2Q8WZ82 227 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 FBXO32Q969P5 355 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 ZSWIM3Q96MP5 696 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 ASB16Q96NS5 453 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 DEF6Q9H4E7 631 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 KCNK12Q9HB15 430 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 TRPM5Q9NZQ8 1165 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 ARHGAP20Q9P2F6 1191 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 NCANO14594 1321 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 USP27XA6NNY8 438 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 M0QYV0 167 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 CYP26A1O43174 497 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 THAP12O43422 761 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 PNMA6AP0CW24 399 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-208ENST00000588667 FERP16591 822 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 PTK2Q05397 1052 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 KLHL30Q0D2K2 578 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 MAPK8IP2Q13387 824 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-208ENST00000588667 TDRD12Q587J7 1177 aaKnown RBP21.22■□□□□ 0.99
ATG4D-208ENST00000588667 FAM78AQ5JUQ0 283 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 PIGZQ86VD9 579 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 ZSCAN18Q8TBC5 510 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-208ENST00000588667 SMARCD2Q92925 531 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 PPP1R13BQ96KQ4 1090 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms