RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	WHAMM	Q8TF30	809 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	SEMA4D	Q92854	862 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	EEF2KMT	Q96G04	330 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	SMO	Q99835	787 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	MMRN2	Q9H8L6	949 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ECT2	Q9H8V3	914 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TLR8	Q9NR97	1041 aa	Known RBP	13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CISH	Q9NSE2	258 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	HMGXB4	Q9UGU5	601 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	SCML2	Q9UQR0	700 aa		13.32	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	E2F8	A0AVK6	867 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PPP1R3G	B7ZBB8	358 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	LEFTY2	O00292	366 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	LILRB5	O75023	590 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GADD45B	O75293	160 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TDGF1	P13385	188 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CCDC130	P13994	396 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TBXAS1	P24557	533 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GJA4	P35212	333 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PSEN1	P49768	467 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	MARS	P56192	900 aa	Known RBP	13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	MAP3K7CL	P57077	242 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	SLC8A3	P57103	927 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PON2	Q15165	354 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CBWD6	Q4V339	395 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CBWD3	Q5JTY5	395 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CBWD5	Q5RIA9	395 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ARHGAP17	Q68EM7	881 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CLEC20A	Q6ZU45	233 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ZMIZ2	Q8NF64	920 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	SCAMP5	Q8TAC9	235 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	RIN3	Q8TB24	985 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ERCC4	Q92889	916 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TMEM176A	Q96HP8	235 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	DUSP16	Q9BY84	665 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	RNF38	Q9H0F5	515 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	FAM49B	Q9NUQ9	324 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	KIAA1257	Q9ULG3	409 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CPQ	Q9Y646	472 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	EP300	Q09472	2414 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	FRYL	O94915	3013 aa		13.31	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TRIM49B	A6NDI0	452 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	OTOL1	A6NHN0	477 aa	Predicted RBP	13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CHURC1-FNTB	B4DL54	471 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	COCH	O43405	550 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ABL1	P00519	1130 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ARSA	P15289	507 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CD44	P16070	742 aa	Known RBP	13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CD58	P19256	250 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	BMP6	P22004	513 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CNR2	P34972	360 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ANP32A	P39687	249 aa	Known RBP	13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	EIF2D	P41214	584 aa	Known RBP	13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	FMO5	P49326	533 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PAK1	Q13153	545 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CUL2	Q13617	745 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CCDC40	Q4G0X9	1142 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TRIM68	Q6AZZ1	485 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	KLHDC10	Q6PID8	442 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TADA2B	Q86TJ2	420 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TTC8	Q8TAM2	541 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	NELFB	Q8WX92	580 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ELMO3	Q96BJ8	720 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	TWNK	Q96RR1	684 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	P2RY13	Q9BPV8	354 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CYLD	Q9NQC7	956 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	KIAA1468	Q9P260	1216 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	WNT6	Q9Y6F9	365 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708		R4GN57	208 aa		13.3	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	OTOGL	Q3ZCN5	2332 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	MYH10	P35580	1976 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CCDC163	A0A0D9SF12	145 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	HHLA1	C9JL84	531 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	BEST1	O76090	585 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	MBL2	P11226	248 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PRKCSH	P14314	528 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ADORA2B	P29275	332 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	RAD23B	P54727	409 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ZXDB	P98169	803 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GOLGA8F	Q08AF8	430 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GOLGA8DP	Q0D2H9	430 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	IFRD2	Q12894	506 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ORC1	Q13415	861 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GAS6	Q14393	721 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	PREPL	Q4J6C6	727 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	KLHL10	Q6JEL2	608 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CLEC17A	Q6ZS10	378 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CCDC186	Q7Z3E2	898 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ADGRG2	Q8IZP9	1017 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	ANKRD52	Q8NB46	1076 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	SLC4A11	Q8NBS3	891 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CD101	Q93033	1021 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CHFR	Q96EP1	664 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	HEXIM2	Q96MH2	286 aa	Known RBP	13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	EPC1	Q9H2F5	836 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	CLIC5	Q9NZA1	410 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	GMIP	Q9P107	970 aa		13.29	□□□□□ -0.28
CDK5RAP3-222	ENST00000581708	USP3	Q9Y6I4	520 aa		13.29	□□□□□ -0.28

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