RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 SAE1Q9UBE0 346 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 ZNF711Q9Y462 761 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 ABHD2P08910 425 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 NLRP11P59045 1033 aaKnown RBP11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 GTF2BQ00403 316 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 OLFML2BQ68BL8 750 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 KCNV1Q6PIU1 500 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 TRABD2AQ86V40 505 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 CCDC33Q8N5R6 958 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 DDX60Q8IY21 1712 aaKnown RBP11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 SULT1E1P49888 294 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 JAM2P57087 298 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 TPI1P60174 286 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 C16orf87Q6PH81 154 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 SETD3Q86TU7 594 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 FITM2Q8N6M3 262 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 NDUFA13Q9P0J0 144 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 SOX13Q9UN79 622 aa11.54□□□□□ -0.56
PCDHGA4-201ENST00000571252 SEC24DO94855 1032 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 ALADP13716 330 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 ARPP19P56211 112 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 BNIP1Q12981 228 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 PDK1Q15118 436 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 RXFP2Q8WXD0 754 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 TNIP3Q96KP6 325 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 ILKAPQ9H0C8 392 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 ZBBXA8MT70 800 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 LIASO43766 372 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 MGRN1O60291 552 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 TXNP10599 105 aaKnown RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 IL10P22301 178 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 MAMLD1Q13495 774 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 SLC15A2Q16348 729 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 UGP2Q16851 508 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 ZNF184Q99676 751 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 CCT7Q99832 543 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 TMEM109Q9BVC6 243 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 MAP3K20Q9NYL2 800 aaKnown RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 VAV3Q9UKW4 847 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 SLC39A10Q9ULF5 831 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 C3orf70A6NLC5 250 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 A8MUI8 341 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 EDF1O60869 148 aaKnown RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 PSMG1O95456 288 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 S100BP04271 92 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 SUPT20HL2P0C7V6 817 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 CYLC2Q14093 348 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 KYAT1Q16773 422 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 GOLGA7BQ2TAP0 167 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 KBTBD12Q3ZCT8 623 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 POU5F2Q8N7G0 328 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 ZSWIM2Q8NEG5 633 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 ZBTB45Q96K62 511 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 KREMEN1Q96MU8 473 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 PXMP2Q9NR77 195 aa11.53□□□□□ -0.56
PCDHGA4-201ENST00000571252 PDK2Q15119 407 aa11.52□□□□□ -0.56
PCDHGA4-201ENST00000571252 PPP2R3CQ969Q6 453 aa11.52□□□□□ -0.56
PCDHGA4-201ENST00000571252 KRT82Q9NSB4 513 aa11.52□□□□□ -0.56
PCDHGA4-201ENST00000571252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.52□□□□□ -0.56
PCDHGA4-201ENST00000571252 DCDC2Q9UHG0 476 aa11.52□□□□□ -0.56
PCDHGA4-201ENST00000571252 C5orf60A6NFR6 353 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 SDR42E2A6NKP2 422 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 FOXO6A8MYZ6 492 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 AKAP10O43572 662 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 RALBP11234 206 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 FASTKD5Q7L8L6 764 aaKnown RBP11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 NIPA1Q7RTP0 329 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 PRMT7Q9NVM4 692 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 FAM198AQ9UFP1 575 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 CDYLQ9Y232 598 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 IRS2Q9Y4H2 1338 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 PLCH1Q4KWH8 1693 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 GRK2P25098 689 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 PTPN11Q06124 597 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 PGM5Q15124 567 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 TWF2Q6IBS0 349 aaKnown RBP11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 DENND5BQ6ZUT9 1274 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 KDELC2Q7Z4H8 507 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 WDR49Q8IV35 697 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 DEFB107AQ8IZN7 70 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 FAM172AQ8WUF8 416 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 TFB1MQ8WVM0 346 aaKnown RBP11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 CNBD2Q96M20 576 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 EPAS1Q99814 870 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 NAT9Q9BTE0 207 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 IL1RAPL1Q9NZN1 696 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 ZNF212Q9UDV6 495 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 R3HDM2Q9Y2K5 976 aaKnown RBP11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 KRT36O76013 467 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 THRAP10827 490 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 CREB1P16220 341 aa11.52□□□□□ -0.57
PCDHGA4-201ENST00000571252 ATP4AP20648 1035 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms