RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CYFIP2Q96F07 1278 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 ARID3AQ99856 593 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 HINFPQ9BQA5 517 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 ARMCX3Q9UH62 379 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 FBXO4Q9UKT5 387 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 ARHGAP26Q9UNA1 814 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 DNAH14Q0VDD8 3507 aa14.43□□□□□ -0.1
VPS9D1-204ENST00000565023 CILPO75339 1184 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 IRF1P10914 325 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 MLLT6P55198 1093 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 INCA1Q0VD86 236 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 HEATR6Q6AI08 1181 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 TTI2Q6NXR4 508 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 C1orf228Q6PIY5 440 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 RBM43Q6ZSC3 357 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 GPRIN1Q7Z2K8 1008 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 MLKLQ8NB16 471 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 PDZD8Q8NEN9 1154 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 WHAMMQ8TF30 809 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 ATRIPQ8WXE1 791 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 CHFRQ96EP1 664 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 HEXIM2Q96MH2 286 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 DUSP9Q99956 384 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 NACA2Q9H009 215 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 CCSER2Q9H7U1 834 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 CFAP97Q9P2B7 532 aa14.42□□□□□ -0.1
VPS9D1-204ENST00000565023 KMT2BQ9UMN6 2715 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 BICDL2A1A5D9 508 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 TNFRSF10BO14763 440 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 OAS1P00973 400 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 EGFP01133 1207 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 LMNAP02545 664 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 ACO1P21399 889 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 HOXC13P31276 330 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 GJA4P35212 333 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 CXCL12P48061 93 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 PPP3CCP48454 512 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 CCR3P51677 355 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 PAK1Q13153 545 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 EML3Q32P44 896 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 DGKKQ5KSL6 1271 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 HECTD3Q5T447 861 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 PPP1R26Q5T8A7 1209 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 FSTL4Q6MZW2 842 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 CLEC20AQ6ZU45 233 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 FILIP1Q7Z7B0 1213 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 ATP2A3Q93084 1043 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 FBRSL1Q9HCM7 1045 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 CISHQ9NSE2 258 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 C2orf42Q9NWW7 574 aa14.41□□□□□ -0.1
VPS9D1-204ENST00000565023 COCHO43405 550 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 PGFP49763 221 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 GALK1P51570 392 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 SLC7A9P82251 487 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 AMPD2Q01433 879 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 GRSF1Q12849 480 aaKnown RBP eCLIP14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 NR1H3Q13133 447 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 PPP2R5DQ14738 602 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 PKN3Q6P5Z2 889 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 CREBRFQ8IUR6 639 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 SLC35C1Q96A29 364 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 CEP63Q96MT8 703 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 HNRNPABQ99729 332 aaKnown RBP14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 P2RY13Q9BPV8 354 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 PRMT8Q9NR22 394 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 ZSCAN32Q9NX65 697 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 NUDT5Q9UKK9 219 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 SH3BP1Q9Y3L3 701 aa14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 TPRP12270 2363 aaKnown RBP14.4□□□□□ -0.1
VPS9D1-204ENST00000565023 CHURC1-FNTBB4DL54 471 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 CYP26A1O43174 497 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 RNF40O75150 1001 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 NFATC1O95644 943 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 OLFM2O95897 454 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 CD19P15391 556 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 PFKLP17858 780 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 FMO5P49326 533 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 FNTBP49356 437 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 DMWDQ09019 674 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 CUL2Q13617 745 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 CCINQ13939 588 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 LPAL2Q16609 132 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 ZNF528Q3MIS6 628 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 DPCR1Q3MIW9 517 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 TMEM196Q5HYL7 178 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 SPEM1Q8N4L4 309 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 SLC4A11Q8NBS3 891 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 OVCA2Q8WZ82 227 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 CD101Q93033 1021 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 WBP2Q969T9 261 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 TMEM176AQ96HP8 235 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 MED15Q96RN5 788 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 FBXO44Q9H4M3 255 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 METTL14Q9HCE5 456 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 CSNK1G1Q9HCP0 422 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 POLR3BQ9NW08 1133 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 RWDD2AQ9UIY3 292 aa14.39□□□□□ -0.11
VPS9D1-204ENST00000565023 ZNF292O60281 2723 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms