RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ATXN1P54253 815 aaKnown RBP19.99■□□□□ 0.79
SMPD3-203ENST00000563226 HDAC4P56524 1084 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 AUHQ13825 339 aaKnown RBP19.99■□□□□ 0.79
SMPD3-203ENST00000563226 KIAA0319Q5VV43 1072 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 UNC45BQ8IWX7 931 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 FUKQ8N0W3 1084 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 TTC13Q8NBP0 860 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 TSPYL1Q9H0U9 437 aa19.99■□□□□ 0.79
SMPD3-203ENST00000563226 TSPYL2Q9H2G4 693 aaPredicted RBP19.99■□□□□ 0.79
SMPD3-203ENST00000563226 TPX2Q9ULW0 747 aaKnown RBP19.99■□□□□ 0.79
SMPD3-203ENST00000563226 TMEM88BA6NKF7 163 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 RASGRF2O14827 1237 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 RGS16O15492 202 aaPredicted RBP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 AOC2O75106 756 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 PRKAR2AP13861 404 aaKnown RBP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 IL4RP24394 825 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 THPOP40225 353 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 NRLP54845 237 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 FAM182AQ5T1J6 154 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 RNASEH2BQ5TBB1 312 aaKnown RBP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 SLC26A9Q7LBE3 791 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 ZDHHC17Q8IUH5 632 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 RBM15Q96T37 977 aaKnown RBP eCLIP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 SNRNP25Q9BV90 132 aaKnown RBP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 RNF186Q9NXI6 227 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 THSD7BQ9C0I4 1608 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 MGEA5O60502 916 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 BEST1O76090 585 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 CD52P31358 61 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 CLCNKBP51801 687 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 EIF3EP60228 445 aaKnown RBP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 C6orf118Q5T5N4 469 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 CCSAPQ6IQ19 270 aaPredicted RBP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 AGMOQ6ZNB7 445 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 PAQR9Q6ZVX9 377 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 C3orf58Q8NDZ4 430 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 KLHDC9Q8NEP7 349 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 BCAS4Q8TDM0 211 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 NDRG1Q92597 394 aaKnown RBP19.98■□□□□ 0.79
SMPD3-203ENST00000563226 TNIP3Q96KP6 325 aa19.98■□□□□ 0.79
SMPD3-203ENST00000563226 IBSPP21815 317 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-203ENST00000563226 SCNN1GP51170 649 aa19.97■□□□□ 0.79
SMPD3-203ENST00000563226 KRT81Q14533 505 aa19.97■□□□□ 0.79
SMPD3-203ENST00000563226 PTGISQ16647 500 aa19.97■□□□□ 0.79
SMPD3-203ENST00000563226 TAB3Q8N5C8 712 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-203ENST00000563226 MDM1Q8TC05 714 aa19.97■□□□□ 0.79
SMPD3-203ENST00000563226 PAAF1Q9BRP4 392 aa19.97■□□□□ 0.79
SMPD3-203ENST00000563226 C11orf84Q9BUA3 381 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-203ENST00000563226 FRMD8P1Q9BZ68 369 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-203ENST00000563226 MAGEB5Q9BZ81 275 aa19.97■□□□□ 0.79
SMPD3-203ENST00000563226 PCDH18Q9HCL0 1135 aa19.97■□□□□ 0.79
SMPD3-203ENST00000563226 ARL5CA6NH57 179 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 A6NNZ2 444 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 GHRP10912 638 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 SNX16P57768 344 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 GAD2Q05329 585 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 FASTKD3Q14CZ7 662 aaKnown RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 TUBB8Q3ZCM7 444 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 TNFAIP8L3Q5GJ75 292 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 PIGZQ86VD9 579 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 RELL1Q8IUW5 271 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 SPATA18Q8TC71 538 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 SENP8Q96LD8 212 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 RNF157Q96PX1 679 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 HNRNPABQ99729 332 aaKnown RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 MAK16Q9BXY0 300 aaKnown RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 SAYSD1Q9NPB0 183 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 CHST12Q9NRB3 414 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 CALCOCO1Q9P1Z2 691 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 CTNNAL1Q9UBT7 734 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 PADI3Q9ULW8 664 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 TIMM13Q9Y5L4 95 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 GABRDO14764 452 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 THP07101 528 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 IVLP07476 585 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 RBP3P10745 1247 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 PTPN1P18031 435 aaKnown RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 RPL22P35268 128 aaKnown RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 MAGEA4P43358 317 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 SEC24CP53992 1094 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 MORF4L2Q15014 288 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 NOMO1Q15155 1222 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 CCDC38Q502W7 563 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 BOLA3Q53S33 107 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 HP1BP3Q5SSJ5 553 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 ANKRD22Q5VYY1 191 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 C1orf228Q6PIY5 440 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 RPAINQ86UA6 219 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 PQLC3Q8N755 202 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 FAM71DQ8N9W8 422 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 TEKT4Q8WW24 435 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 RSAD2Q8WXG1 361 aa19.96■□□□□ 0.79
SMPD3-203ENST00000563226 PRCCQ92733 491 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-203ENST00000563226 CASTOR2A6NHX0 329 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 XPO1O14980 1071 aaKnown RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 MCF2LO15068 1137 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 AGTP01019 485 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 PTPN9P43378 593 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 RABGGTBP53611 331 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 ADIGQ0VDE8 80 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms