RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 SSH3Q8TE77 659 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 FUBP1Q96AE4 644 aaKnown RBP5.43□□□□□ -1.54
PRPF39-212ENST00000557477 LTV1Q96GA3 475 aaPredicted RBP5.43□□□□□ -1.54
PRPF39-212ENST00000557477 FAM227BQ96M60 508 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 PLEKHG4BQ96PX9 1271 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 CDK5RAP1Q96SZ6 601 aaKnown RBP5.43□□□□□ -1.54
PRPF39-212ENST00000557477 PRPF18Q99633 342 aaKnown RBP5.43□□□□□ -1.54
PRPF39-212ENST00000557477 TMEM120AQ9BXJ8 343 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 ZBTB26Q9HCK0 441 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 TMEM8AQ9HCN3 771 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 VPS51Q9UID3 782 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 GPR52Q9Y2T5 361 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 TSC22D4Q9Y3Q8 395 aa5.43□□□□□ -1.54
PRPF39-212ENST00000557477 CENPVL1A0A0U1RR11 272 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 COQ9O75208 318 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 LMNAP02545 664 aaKnown RBP5.42□□□□□ -1.54
PRPF39-212ENST00000557477 FGAP02671 866 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 UQCRC1P31930 480 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 PGDP52209 483 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 BCAT1P54687 386 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 ADAM17P78536 824 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 DGCR2P98153 550 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 GUCY1B3Q02153 619 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 NSUN2Q08J23 767 aaKnown RBP eCLIP5.42□□□□□ -1.54
PRPF39-212ENST00000557477 GPS1Q13098 491 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 EIF2B5Q13144 721 aaKnown RBP5.42□□□□□ -1.54
PRPF39-212ENST00000557477 CCNIQ14094 377 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 POSTNQ15063 836 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 SF3B3Q15393 1217 aaKnown RBP5.42□□□□□ -1.54
PRPF39-212ENST00000557477 ABLIM2Q6H8Q1 611 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 JMJD6Q6NYC1 403 aaPredicted RBP5.42□□□□□ -1.54
PRPF39-212ENST00000557477 MZT2AQ6P582 158 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 SUGP1Q8IWZ8 645 aaKnown RBP5.42□□□□□ -1.54
PRPF39-212ENST00000557477 ABRAQ8N0Z2 381 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 OR1N1Q8NGS0 311 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 MYCBPAPQ8TBZ2 947 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 STT3BQ8TCJ2 826 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 CACTINQ8WUQ7 758 aaKnown RBP5.42□□□□□ -1.54
PRPF39-212ENST00000557477 TRAPPC12Q8WVT3 735 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 ASB10Q8WXI3 467 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 ISCA1Q9BUE6 129 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 KATNAL1Q9BW62 490 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 C1QTNF3Q9BXJ4 246 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 ANKFY1Q9P2R3 1169 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 DNAJB11Q9UBS4 358 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 DTNAQ9Y4J8 743 aa5.42□□□□□ -1.54
PRPF39-212ENST00000557477 PTPRGP23470 1445 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 TEX14Q8IWB6 1497 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 IPO5O00410 1097 aaKnown RBP5.41□□□□□ -1.54
PRPF39-212ENST00000557477 USP1O94782 785 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 NPPBP16860 134 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 SLC5A2P31639 672 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 TIAL1Q01085 375 aaKnown RBP eCLIP5.41□□□□□ -1.54
PRPF39-212ENST00000557477 FOXO1Q12778 655 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 EFEMP1Q12805 493 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 FSTL1Q12841 308 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 FHL3Q13643 280 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 PRKG1Q13976 671 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 SPATS1Q496A3 300 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 TIGD2Q4W5G0 525 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 SULT6B1Q6IMI4 303 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 MAVSQ7Z434 540 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 B3GALNT2Q8NCR0 500 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 OSCP1Q8WVF1 389 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 TBC1D20Q96BZ9 403 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 PTCD3Q96EY7 689 aaKnown RBP5.41□□□□□ -1.54
PRPF39-212ENST00000557477 C17orf80Q9BSJ5 609 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 EPS8L2Q9H6S3 715 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 SAGE1Q9NXZ1 904 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 HS3ST4Q9Y661 456 aa5.41□□□□□ -1.54
PRPF39-212ENST00000557477 CUL7Q14999 1698 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 OR2W5A6NFC9 320 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 ZAR1LA6NP61 321 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 SRGNP10124 158 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 ITGAMP11215 1152 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 GYS1P13807 737 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 PAX3P23760 479 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 YY1P25490 414 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 PRKAR1BP31321 381 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 HTR7P34969 479 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 CLCN2P51788 898 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 ATXN1P54253 815 aaKnown RBP5.4□□□□□ -1.54
PRPF39-212ENST00000557477 BIRC3Q13489 604 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 TIGD6Q17RP2 521 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 HSP90AB4PQ58FF6 505 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 SLC9A4Q6AI14 798 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 RHOUQ7L0Q8 258 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 PRRT2Q7Z6L0 340 aaPredicted RBP5.4□□□□□ -1.54
PRPF39-212ENST00000557477 ZNF354CQ86Y25 554 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 GATAD2AQ86YP4 633 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 IZUMO1Q8IYV9 350 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 TOR1AIP2Q8NFQ8 470 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 ATRIPQ8WXE1 791 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 ZNF668Q96K58 619 aaPredicted RBP5.4□□□□□ -1.54
PRPF39-212ENST00000557477 HIST1H2AAQ96QV6 131 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 PAGR1Q9BTK6 254 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 MLST8Q9BVC4 326 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 NRDE2Q9H7Z3 1164 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 MLXIPQ9HAP2 919 aa5.4□□□□□ -1.54
PRPF39-212ENST00000557477 ITM2CQ9NQX7 267 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms