RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 NSUN6Q8TEA1 469 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 POF1BQ8WVV4 589 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 KCTD13Q8WZ19 329 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 HDAC2Q92769 488 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 NMD3Q96D46 503 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 INTS4Q96HW7 963 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 PPM1MQ96MI6 270 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 TM9SF2Q99805 663 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 NEUROD4Q9HD90 331 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 TIMMDC1Q9NPL8 285 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 TSR3Q9UJK0 312 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 NSFL1CQ9UNZ2 370 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 PCDHGB5Q9Y5G0 923 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 BCORQ6W2J9 1755 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 RREB1Q92766 1687 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 PRSS44E7EML9 344 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 E7ENQ6 273 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 E7EVH7 732 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 L7N2F9 121 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 SHOXO15266 292 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 JAK2O60674 1132 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 SERPINI2O75830 405 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 GOSR1O95249 250 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 BAG3O95817 575 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 RFC5P40937 340 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 PURAQ00577 322 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 SERINC3Q13530 473 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 FAM76BQ5HYJ3 339 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 RNF220Q5VTB9 566 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 KIAA1841Q6NSI8 718 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 CCDC28AQ8IWP9 274 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 ZNF321PQ8N8H1 164 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 ANKFN1Q8N957 763 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 MSANTD3Q96H12 275 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 TMEM68Q96MH6 324 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 AIFM3Q96NN9 605 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 SLC29A1Q99808 456 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 C19orf43Q9BQ61 176 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 TDRD1Q9BXT4 1180 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 TRIM55Q9BYV6 548 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 IMPG2Q9BZV3 1241 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 VIPAS39Q9H9C1 493 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 BMP2KQ9NSY1 1161 aaPredicted RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 CPSF3Q9UKF6 684 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 CNOT6Q9ULM6 557 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 PCDHGA1Q9Y5H4 931 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 SESN1Q9Y6P5 492 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 NUMBLQ9Y6R0 609 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 MYO5AQ9Y4I1 1855 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 BRWD3Q6RI45 1802 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 SBF2Q86WG5 1849 aa6.43□□□□□ -1.38
LMO3-225ENST00000541295 WDR33Q9C0J8 1336 aaKnown RBP6.43□□□□□ -1.38
LMO3-225ENST00000541295 PLGP00747 810 aaPredicted RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 CALB1P05937 261 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 VAV1P15498 845 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 GJA1P17302 382 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 LIFRP42702 1097 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 POU3F4P49335 361 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 ST3GAL1Q11201 340 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 ZNF827Q17R98 1081 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 USP39Q53GS9 565 aaKnown RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 ALG1LQ6GMV1 187 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 XRRA1Q6P2D8 792 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 KDM7AQ6ZMT4 941 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 TRIM72Q6ZMU5 477 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 UNC13DQ70J99 1090 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 CDR2LQ86X02 465 aaPredicted RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 ZSCAN29Q8IWY8 852 aaPredicted RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 IFT20Q8IY31 132 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 ELMOD2Q8IZ81 293 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 LCORLQ8N3X6 602 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 HCAR2Q8TDS4 363 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 NELFBQ8WX92 580 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 TRIM43Q96BQ3 446 aaPredicted RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 MENTQ9BUN1 341 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 ZCCHC2Q9C0B9 1178 aaKnown RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 VPS45Q9NRW7 570 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 ZNF219Q9P2Y4 722 aaPredicted RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 DNAJB4Q9UDY4 337 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 SCN7AQ01118 1682 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 RTL9Q8NET4 1388 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 PHLPP2Q6ZVD8 1323 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 CYP3A7-CYP3A51PA0A087WV96 503 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 MINDY4BA8MYZ0 360 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 ALG1L2C9J202 215 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 WNT7AO00755 349 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 RB1P06400 928 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 ASGR1P07306 291 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 CYP3A7P24462 503 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 GNA11P29992 359 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 HIBADHP31937 336 aaKnown RBP6.42□□□□□ -1.38
LMO3-225ENST00000541295 OR1G1P47890 313 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 STARP49675 285 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 RHAGQ02094 409 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 KCNAB2Q13303 367 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 PON2Q15165 354 aa6.42□□□□□ -1.38
LMO3-225ENST00000541295 CMPK2Q5EBM0 449 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms