RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 KRT35Q92764 455 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 TMEM176AQ96HP8 235 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 RBM15Q96T37 977 aaKnown RBP eCLIP9.04□□□□□ -0.962e-7■■□□□ 13.5
CTNND1-232ENST00000532649 SLC25A13Q9UJS0 675 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 TFR2Q9UP52 801 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CYP3A4P08684 503 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 KRT20P35900 424 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 RANBP1P43487 201 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 SLC16A1P53985 500 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 SHROOM1Q2M3G4 852 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 TMEM119Q4V9L6 283 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 BOLA3Q53S33 107 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CELF3Q5SZQ8 465 aaKnown RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 SV2AQ7L0J3 742 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CENPTQ96BT3 561 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 TSPAN17Q96FV3 270 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 DDX43Q9NXZ2 648 aaKnown RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ANKRD26Q9UPS8 1709 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 F5H5T6 163 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 DEAF1O75398 565 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 NDUFS3O75489 264 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 VCLP18206 1134 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 GTF2E2P29084 291 aaKnown RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ST13P50502 369 aaKnown RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ANXA11P50995 505 aaKnown RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 NOGQ13253 232 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 BTG3Q14201 252 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 C11orf74Q86VG3 221 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 KIAA0895Q8NCT3 520 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 PTPRN2Q92932 1015 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CINPQ9BW66 212 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 GALNT8Q9NY28 637 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 TRPM5Q9NZQ8 1165 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 NEU2Q9Y3R4 380 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 FRMPD4Q14CM0 1322 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 SLC15A5A6NIM6 579 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CFAP99D6REC4 459 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ATP5HO75947 161 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ALOX15P16050 662 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 JAK1P23458 1154 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ATXN3P54252 364 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 EPHB3P54753 998 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ELAVL2Q12926 359 aaKnown RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CXCL17Q6UXB2 119 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 BTNL9Q6UXG8 535 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CCDC60Q8IWA6 550 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 HOMEZQ8IX15 550 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 TNIP2Q8NFZ5 429 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 PPP1R2P1Q96PQ5 205 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ARHGEF38Q9NXL2 777 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CD274Q9NZQ7 290 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 HOXC6P09630 235 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ITIH2P19823 946 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 FBXW10Q5XX13 1052 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 OVOS1Q6IE37 1185 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 HDDC2Q7Z4H3 204 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 PPP1R13LQ8WUF5 828 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 ADAM33Q9BZ11 813 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 COPS7BQ9H9Q2 264 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-232ENST00000532649 CYP3A43Q9HB55 503 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 PKD2L2Q9NZM6 624 aa9.04□□□□□ -0.96
CTNND1-232ENST00000532649 MON2Q7Z3U7 1717 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 A0A087X0T9 212 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 TTLL13PA6NNM8 815 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 FAM228BP0C875 321 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 ACADMP11310 421 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 AXLP30530 894 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 YWHAZP63104 245 aaKnown RBP9.03□□□□□ -0.96
CTNND1-232ENST00000532649 FKBP1BP68106 108 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 ALDH6A1Q02252 535 aaKnown RBP9.03□□□□□ -0.96
CTNND1-232ENST00000532649 PTPN11Q06124 597 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-232ENST00000532649 RUNX1T1Q06455 604 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 EFEMP1Q12805 493 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 STAT4Q14765 748 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 GSTA3Q16772 222 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 ZNF544Q6NX49 715 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 MTHFD1LQ6UB35 978 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 ANO5Q75V66 913 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 VSIG10LQ86VR7 867 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 MRPL48Q96GC5 212 aaKnown RBP9.03□□□□□ -0.96
CTNND1-232ENST00000532649 WNK4Q96J92 1243 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 C17orf80Q9BSJ5 609 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 GPR63Q9BZJ6 419 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 GID8Q9NWU2 228 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 PLAGL2Q9UPG8 496 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 PCDHGA4Q9Y5G9 962 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 NFAT5O94916 1531 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 ACKR2O00590 384 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 PGK1P00558 417 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 ATP6V1C1P21283 382 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 PPP2R2AP63151 447 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 EVX2Q03828 476 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 CNTN1Q12860 1018 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 LRRC14Q15048 493 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 MTFR1Q15390 333 aa9.03□□□□□ -0.96
CTNND1-232ENST00000532649 SLC47A2Q86VL8 602 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms