RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 ABCF3Q9NUQ8 709 aa2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 TAS2R10Q9NYW0 307 aa2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 DNMT3BQ9UBC3 853 aaKnown RBP2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 HESX1Q9UBX0 185 aa2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 PLA2G2DQ9UNK4 145 aa2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 VWA7Q9Y334 891 aa2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 USP15Q9Y4E8 981 aaPredicted RBP2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 PCDHGB5Q9Y5G0 923 aa2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 SOS1Q07889 1333 aaPredicted RBP2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 ZMYM3Q14202 1370 aa2.82□□□□□ -1.96
SCARNA3-201ENST00000517097 CXorf49A8MYA2 514 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 UBE2CO00762 179 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TNPO2O14787 897 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CLGNO14967 610 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 GSC2O15499 205 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ZSCAN9O15535 394 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ADAMTS4O75173 837 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 HAUS5O94927 633 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 BAG2O95816 211 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CHEK2O96017 543 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 KNG1P01042 644 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TUBB4AP04350 444 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TM4SF1P30408 202 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CASRP41180 1078 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 MAGEA10P43363 369 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 HARS2P49590 506 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 MMP14P50281 582 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 KCNQ1P51787 676 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 WASHC5Q12768 1159 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TCF15Q12870 199 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 SF3A3Q12874 501 aaKnown RBP eCLIP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 EPS8Q12929 822 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 PTP4A2Q12974 167 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 SMAD4Q13485 552 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 DCTN2Q13561 401 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TDGQ13569 410 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CAMK1Q14012 370 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ASIC2Q16515 512 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ZIK1Q3SY52 487 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 PLEKHN1Q494U1 663 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CACHD1Q5VU97 1274 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 GPR139Q6DWJ6 353 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ZNF529Q6P280 563 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ZC3H14Q6PJT7 736 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 IKBIPQ70UQ0 350 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 RASGRP2Q7LDG7 609 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 UBE3BQ7Z3V4 1068 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 DNAJB7Q7Z6W7 309 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC51AQ86UW1 340 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 STK32CQ86UX6 486 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TTC30AQ86WT1 665 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TAGAPQ8N103 731 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 FAM71DQ8N9W8 422 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 AVL9Q8NBF6 648 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 KCTD6Q8NC69 237 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 MSANTD4Q8NCY6 345 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 SLC17A8Q8NDX2 589 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TMIEQ8NEW7 156 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TOR1AIP2Q8NFQ8 470 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 LINS1Q8NG48 757 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 GOT1L1Q8NHS2 421 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ETNPPLQ8TBG4 499 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 HMGB4Q8WW32 186 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CPA5Q8WXQ8 436 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 SH3KBP1Q96B97 665 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 LIN37Q96GY3 246 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 HIC2Q96JB3 615 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ZSWIM3Q96MP5 696 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 JAKMIP1Q96N16 626 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 PWWP2AQ96N64 755 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 MOGAT1Q96PD6 335 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 GPR20Q99678 358 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 SYT3Q9BQG1 590 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 DESI2Q9BSY9 194 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 TTPALQ9BTX7 342 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 MECRQ9BV79 373 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 FTOQ9C0B1 505 aaKnown RBP eCLIP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 SIK2Q9H0K1 926 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 MUC13Q9H3R2 512 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 DBNDD1Q9H9R9 158 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 GRPEL1Q9HAV7 217 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 PLEKHA2Q9HB19 425 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 GOLGA2P5Q9HBQ8 144 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 BARX1Q9HBU1 254 aaPredicted RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 PRDM7Q9NQW5 492 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 MRPS18AQ9NVS2 196 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 C19orf73Q9NVV2 129 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 HCFC1R1Q9NWW0 138 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 ZDHHC7Q9NXF8 308 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 KLHL14Q9P2G3 628 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CNOT7Q9UIV1 285 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 CLCA2Q9UQC9 943 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 RBM8AQ9Y5S9 174 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 LYVE1Q9Y5Y7 322 aa2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 OAS3Q9Y6K5 1087 aaKnown RBP2.81□□□□□ -1.96
SCARNA3-201ENST00000517097 GPRASP1Q5JY77 1395 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 PNPLA7Q6ZV29 1317 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 KDM3AQ9Y4C1 1321 aa2.8□□□□□ -1.96
SCARNA3-201ENST00000517097 C17orf113A0A1B0GUU1 675 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms