RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 EFHC1Q5JVL4 640 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 C10orf76Q5T2E6 689 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 GLYCTKQ8IVS8 523 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 SCN4BQ8IWT1 228 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 SIX6OS1Q8N1H7 587 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 TXLNBQ8N3L3 684 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 C12orf29Q8N999 325 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ZMIZ2Q8NF64 920 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 DDX1Q92499 740 aaKnown RBP8.91□□□□□ -0.98
PDGFC-205ENST00000506880 SMARCD2Q92925 531 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 FBXO32Q969P5 355 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ELSPBP1Q96BH3 223 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 FAM84AQ96KN4 292 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 NAP1L5Q96NT1 182 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-205ENST00000506880 DNAJC7Q99615 494 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 CORO1BQ9BR76 489 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 XPO4Q9C0E2 1151 aaKnown RBP8.91□□□□□ -0.98
PDGFC-205ENST00000506880 CRISPLD1Q9H336 500 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 RETREG1Q9H6L5 497 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 IL21Q9HBE4 155 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 ABCC13Q9NSE7 274 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 HMGXB4Q9UGU5 601 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 PAXBP1Q9Y5B6 917 aa8.91□□□□□ -0.98
PDGFC-205ENST00000506880 CUL9Q8IWT3 2517 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 TRAV19A0A0A6YYK7 116 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 ZNF840PA6NDX5 716 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 H3BQ06 376 aaPredicted RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 RNF225M0QZC1 329 aaPredicted RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 TEX33O43247 280 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 LRRN2O75325 713 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 OAS1P00973 400 aaKnown RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 CYP1A1P04798 512 aaPredicted RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 SERPING1P05155 500 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 CALB1P05937 261 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 CCDC130P13994 396 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 GABRR2P28476 465 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 AVPR1AP37288 418 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 USP8P40818 1118 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 MAP3K7CLP57077 242 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 GSDMDP57764 484 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 COG7P83436 770 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 AMPD2Q01433 879 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 CENPCQ03188 943 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 RING1Q06587 406 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 PDE4CQ08493 712 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 DDR2Q16832 855 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 PREPLQ4J6C6 727 aaPredicted RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 ZNF394Q53GI3 561 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 HECTD3Q5T447 861 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 SCARA3Q6AZY7 606 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 MSANTD2Q6P1R3 559 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 EP400NLQ6ZTU2 488 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 GAREM2Q75VX8 874 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 IRF2BP2Q7Z5L9 587 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 GRASPQ7Z6J2 395 aaPredicted RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 PIGZQ86VD9 579 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 TTC30AQ86WT1 665 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 PHF13Q86YI8 300 aaPredicted RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 NPAS3Q8IXF0 933 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 CELF5Q8N6W0 485 aaKnown RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 ZNF557Q8N988 423 aaPredicted RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 ANP32BQ92688 251 aaKnown RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 DNASE1L2Q92874 299 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 FGF13Q92913 245 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 AZIN2Q96A70 460 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 ASB16Q96NS5 453 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 DCLK3Q9C098 648 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 PDCL3Q9H2J4 239 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 POMKQ9H5K3 350 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 ZFP14Q9HCL3 533 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 LUC7LQ9NQ29 371 aaKnown RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 FAM49BQ9NUQ9 324 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 THG1LQ9NWX6 298 aaKnown RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 TBC1D14Q9P2M4 693 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 NOCTQ9UK39 431 aaKnown RBP8.9□□□□□ -0.98
PDGFC-205ENST00000506880 ARHGAP26Q9UNA1 814 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 SLC27A5Q9Y2P5 690 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 F5P12259 2224 aa8.9□□□□□ -0.98
PDGFC-205ENST00000506880 XIRP2A4UGR9 3374 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 E2F8A0AVK6 867 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 NRDCO43847 1150 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 HSF2BPO75031 334 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 F9P00740 461 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 GYPCP04921 128 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SPATA31D3P0C874 917 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SLC2A3P11169 496 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
PDGFC-205ENST00000506880 ADORA2BP29275 332 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 ATP5C1P36542 298 aaKnown RBP8.89□□□□□ -0.99
PDGFC-205ENST00000506880 KLHL30Q0D2K2 578 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 TAF10Q12962 218 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 PDCLQ13371 301 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 ASIC2Q16515 512 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 ARHGAP29Q52LW3 1261 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SPATA31D4Q6ZUB0 917 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SLC26A9Q7LBE3 791 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 SLC47A2Q86VL8 602 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 MFSD6LQ8IWD5 586 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 CCDC170Q8IYT3 715 aa8.89□□□□□ -0.99
PDGFC-205ENST00000506880 CMTM8Q8IZV2 173 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms