RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 MYPNQ86TC9 1320 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 A0A088AWK7 358 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 H7C0C1 242 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 XPOTO43592 962 aaKnown RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 PSMD10O75832 226 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CSPG5O95196 566 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 APRTP07741 180 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 UNGP13051 313 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SAT1P21673 171 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CIITAP33076 1130 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ATP5OP48047 213 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 OSTNP61366 133 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 MYLK3Q32MK0 819 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TRMT5Q32P41 509 aaKnown RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 Q3C1V9 767 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 RAB6CQ53S08 254 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 EFHC2Q5JST6 749 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ZBTB41Q5SVQ8 909 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TATDN1Q6P1N9 297 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SYDE1Q6ZW31 735 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 PDSS2Q86YH6 399 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SPNS2Q8IVW8 549 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ARHGAP18Q8N392 663 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 FAF2Q96CS3 445 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 OLFM3Q96PB7 478 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 YIPF2Q9BWQ6 316 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 RAB6CQ9H0N0 254 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 VPS11Q9H270 941 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 C17orf75Q9HAS0 396 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 RAB6BQ9NRW1 208 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 UBAP1Q9NZ09 502 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SENP1Q9P0U3 644 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF232Q9UNY5 417 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 DTNAQ9Y4J8 743 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TELO2Q9Y4R8 837 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 IQANK1A0A1B0GTG1 560 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CCDC78A2IDD5 438 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 TMX2-CTNND1H3BSU7 103 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 PLSCR1O15162 318 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 BUD23O43709 281 aaKnown RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SEC24DO94855 1032 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CHN2P52757 468 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 VCPP55072 806 aaKnown RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SH3D19Q5HYK7 790 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 DNAJC24Q6P3W2 148 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 TRMT10BQ6PF06 316 aaKnown RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 DARS2Q6PI48 645 aaKnown RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 LDHDQ86WU2 507 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SP8Q8IXZ3 490 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 PHTF2Q8N3S3 785 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 FEZF2Q8TBJ5 459 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SLCO2A1Q92959 643 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 AZIN2Q96A70 460 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 UNKQ9C0B0 810 aaKnown RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 TMEM39BQ9GZU3 492 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 ARMC7Q9H6L4 198 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 STK32BQ9NY57 414 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 FIS1Q9Y3D6 152 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 DOT1LQ8TEK3 1739 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CNTNAP2Q9UHC6 1331 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 A8MXQ7 604 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 WDR64B1ANS9 1081 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 STX16-NPEPL1H3BU86 382 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 NFIBO00712 420 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 VILLO15195 856 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 HLA-DRAP01903 254 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SRGAP2CP0DJJ0 459 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SRGAP2BP0DMP2 458 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 RBP3P10745 1247 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CRABP2P29373 138 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 GTF2H1P32780 548 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CDH15P55291 814 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 PRAMEP78395 509 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 HPCAP84074 193 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 PPIDQ08752 370 aaKnown RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 STX3Q13277 289 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CCNIQ14094 377 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 C16orf72Q14CZ0 275 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 MORF4L2Q15014 288 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 GSTA3Q16772 222 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 ITPRIPL1Q6GPH6 555 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SCYL2Q6P3W7 929 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 ADGRD1Q6QNK2 874 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CES3Q6UWW8 571 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 NET1Q7Z628 596 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CDR2LQ86X02 465 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SIAH1Q8IUQ4 282 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 FAM172AQ8WUF8 416 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF516Q92618 1163 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF341Q9BYN7 854 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 RNPEPQ9H4A4 650 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 CAAP1Q9H8G2 361 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 USP29Q9HBJ7 922 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 KMT5AQ9NQR1 393 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF358Q9NW07 568 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 GPATCH2LQ9NWQ4 482 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SLC24A2Q9UI40 661 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 SOX13Q9UN79 622 aa7.92□□□□□ -1.14
NEDD9-208ENST00000504387 AMHP03971 560 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TFAP2AP05549 437 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms