RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 CPA4Q9UI42 421 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 MED16Q9Y2X0 877 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 FER1L4A9Z1Z3 1794 aa5.31□□□□□ -1.56
CLTC-208ENST00000496076 PRSS44E7EML9 344 aa5.3□□□□□ -1.56
CLTC-208ENST00000496076 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
CLTC-208ENST00000496076 THBS4P35443 961 aa5.3□□□□□ -1.56
CLTC-208ENST00000496076 CFHR1Q03591 330 aa5.3□□□□□ -1.56
CLTC-208ENST00000496076 RANBP10Q6VN20 620 aa5.3□□□□□ -1.56
CLTC-208ENST00000496076 PTCHD4Q6ZW05 846 aa5.3□□□□□ -1.56
CLTC-208ENST00000496076 ZFYVE19Q96K21 471 aa5.3□□□□□ -1.56
CLTC-208ENST00000496076 GTPBP4Q9BZE4 634 aaKnown RBP5.3□□□□□ -1.56
CLTC-208ENST00000496076 GBA2Q9HCG7 927 aaPredicted RBP5.3□□□□□ -1.56
CLTC-208ENST00000496076 COL4A3BPQ9Y5P4 624 aa5.3□□□□□ -1.56
CLTC-208ENST00000496076 CYSRT1A8MQ03 144 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 SNUPNO95149 360 aaKnown RBP5.29□□□□□ -1.56
CLTC-208ENST00000496076 RPS13P62277 151 aaKnown RBP5.29□□□□□ -1.56
CLTC-208ENST00000496076 LARS2Q15031 903 aaKnown RBP5.29□□□□□ -1.56
CLTC-208ENST00000496076 PTCHD3Q3KNS1 767 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 DAB2IPQ5VWQ8 1189 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 ZNF549Q6P9A3 640 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 GAS2L3Q86XJ1 694 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 RAB11FIP4Q86YS3 637 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 SLC15A4Q8N697 577 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 DNAJC5GQ8N7S2 189 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 ZCRB1Q8TBF4 217 aaKnown RBP5.29□□□□□ -1.56
CLTC-208ENST00000496076 BPIFB1Q8TDL5 484 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 MTFMTQ96DP5 389 aaKnown RBP5.29□□□□□ -1.56
CLTC-208ENST00000496076 TRMOQ9BU70 441 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 ARMT1Q9H993 441 aa5.29□□□□□ -1.56
CLTC-208ENST00000496076 T-ENOLP0DO92 83 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 PLA1AQ53H76 456 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 TMEM63BQ5T3F8 832 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 DCDC5Q6ZRR9 648 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 MVB12AQ96EY5 273 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 MRGPRX1Q96LB2 322 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 P2RX7Q99572 595 aaKnown RBP5.28□□□□□ -1.56
CLTC-208ENST00000496076 PCDH12Q9NPG4 1184 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 CNNM1Q9NRU3 951 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 DRG1Q9Y295 367 aaKnown RBP5.28□□□□□ -1.56
CLTC-208ENST00000496076 NOP58Q9Y2X3 529 aaKnown RBP5.28□□□□□ -1.56
CLTC-208ENST00000496076 SPEF1Q9Y4P9 236 aa5.28□□□□□ -1.56
CLTC-208ENST00000496076 IL33O95760 270 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 DIO1P49895 249 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 EVA1CP58658 441 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 CCNIQ14094 377 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 CERCAMQ5T4B2 595 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 Q6ZTC4 211 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 PELI3Q8N2H9 469 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 LINC01465Q8N7H1 131 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 PLBD2Q8NHP8 589 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 MAFAQ8NHW3 353 aaPredicted RBP5.27□□□□□ -1.57
CLTC-208ENST00000496076 CTHRC1Q96CG8 243 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 SMAD5Q99717 465 aaKnown RBP5.27□□□□□ -1.57
CLTC-208ENST00000496076 MLXIPQ9HAP2 919 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 SNX15Q9NRS6 342 aa5.27□□□□□ -1.57
CLTC-208ENST00000496076 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.27□□□□□ -1.57
CLTC-208ENST00000496076 WASHC2CQ9Y4E1 1318 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 A0A087WWL8 130 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 ALG1L2C9J202 215 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 ALDH2P05091 517 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 ATF7P17544 494 aaPredicted RBP5.26□□□□□ -1.57
CLTC-208ENST00000496076 HYAL1Q12794 435 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 MTX1Q13505 466 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 DENND2CQ68D51 928 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 LMBRD2Q68DH5 695 aaPredicted RBP5.26□□□□□ -1.57
CLTC-208ENST00000496076 C16orf71Q8IYS4 520 aaPredicted RBP5.26□□□□□ -1.57
CLTC-208ENST00000496076 PRPF38AQ8NAV1 312 aaKnown RBP5.26□□□□□ -1.57
CLTC-208ENST00000496076 HS6ST2Q96MM7 605 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 PIH1D1Q9NWS0 290 aaKnown RBP5.26□□□□□ -1.57
CLTC-208ENST00000496076 ZSCAN32Q9NX65 697 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 MGAT4CQ9UBM8 478 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 USP22Q9UPT9 525 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 STXBP5LQ9Y2K9 1186 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 NOTCH4Q99466 2003 aa5.26□□□□□ -1.57
CLTC-208ENST00000496076 CREB1P16220 341 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 BCAT1P54687 386 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 RHDQ02161 417 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 KCNB1Q14721 858 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 SLC9C1Q4G0N8 1177 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 VSTM1Q6UX27 236 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 SPARTQ8N0X7 666 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 MMP21Q8N119 569 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 IGFBPL1Q8WX77 278 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 RAPGEF4Q8WZA2 1011 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 HSPBAP1Q96EW2 488 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 CGRRF1Q99675 332 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 MS4A7Q9GZW8 240 aaPredicted RBP5.25□□□□□ -1.57
CLTC-208ENST00000496076 ZBTB40Q9NUA8 1239 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 GAR1Q9NY12 217 aaKnown RBP5.25□□□□□ -1.57
CLTC-208ENST00000496076 MAFFQ9ULX9 164 aa5.25□□□□□ -1.57
CLTC-208ENST00000496076 M0R3H8 397 aa5.24□□□□□ -1.57
CLTC-208ENST00000496076 AKAP5P24588 427 aa5.24□□□□□ -1.57
CLTC-208ENST00000496076 PRKAR1BP31321 381 aa5.24□□□□□ -1.57
CLTC-208ENST00000496076 YPEL5P62699 121 aa5.24□□□□□ -1.57
CLTC-208ENST00000496076 CTBP1Q13363 440 aa5.24□□□□□ -1.57
CLTC-208ENST00000496076 STIM1Q13586 685 aa5.24□□□□□ -1.57
CLTC-208ENST00000496076 TMEM240Q5SV17 173 aa5.24□□□□□ -1.57
CLTC-208ENST00000496076 CC2D1BQ5T0F9 858 aaKnown RBP5.24□□□□□ -1.57
CLTC-208ENST00000496076 C18orf65Q6ZTR6 163 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms