RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 KCTD6Q8NC69 237 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 GSTCDQ8NEC7 633 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 KLHDC9Q8NEP7 349 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 APPL2Q8NEU8 664 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 MYCBPAPQ8TBZ2 947 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 FAM172AQ8WUF8 416 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 ATXN2LQ8WWM7 1075 aaKnown RBP10.26□□□□□ -0.77
USP39-214ENST00000474572 KCTD13Q8WZ19 329 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 HSPH1Q92598 858 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 WNT8BQ93098 351 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 HAUS1Q96CS2 278 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 RTP4Q96DX8 246 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 TNIP3Q96KP6 325 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 PWWP2AQ96N64 755 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 TMEM121Q9BTD3 319 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 SNRNP25Q9BV90 132 aaKnown RBP10.26□□□□□ -0.77
USP39-214ENST00000474572 RAB6CQ9H0N0 254 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 SNX25Q9H3E2 840 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 GOLGA2P5Q9HBQ8 144 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 PCDH18Q9HCL0 1135 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP39-214ENST00000474572 FAM105AQ9NUU6 356 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 SLC38A7Q9NVC3 462 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 GGA2Q9UJY4 613 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 GABRQQ9UN88 632 aa10.26□□□□□ -0.77
USP39-214ENST00000474572 TDRD15B5MCY1 1934 aaKnown RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 SGK1O00141 431 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 PIK3R2O00459 728 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 MCF2LO15068 1137 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 ALOX15BO15296 676 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 HUS1O60921 280 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 DAB1O75553 588 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 ACSL3O95573 720 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 FAM107AO95990 144 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 RBP3P10745 1247 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 TSHRP16473 764 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 DESP17661 470 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 STIP1P31948 543 aaKnown RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 RPL22P35268 128 aaKnown RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 PSMC4P43686 418 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 EIF3EP60228 445 aaKnown RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 DYNLT1P63172 113 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 IFI35P80217 286 aaPredicted RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 ADCY1Q08828 1119 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 MMRN1Q13201 1228 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 DSC3Q14574 896 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 EFHC1Q5JVL4 640 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 ERMARDQ5T6L9 678 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 TTC19Q6DKK2 380 aaPredicted RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 TWF2Q6IBS0 349 aaKnown RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 PAQR9Q6ZVX9 377 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 TAOK1Q7L7X3 1001 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 SRLQ86TD4 932 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 EXOC3L1Q86VI1 746 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 NLRP14Q86W24 1093 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 MAP7D3Q8IWC1 876 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 UNC45BQ8IWX7 931 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 PPIL6Q8IXY8 311 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 HACE1Q8IYU2 909 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 FUKQ8N0W3 1084 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 PQLC3Q8N755 202 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 PLD5Q8N7P1 536 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 B3GALNT2Q8NCR0 500 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 UHMK1Q8TAS1 419 aaKnown RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 SPATA18Q8TC71 538 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 ZNF473Q8WTR7 871 aaKnown RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 CPT1BQ92523 772 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 CFAP57Q96MR6 1250 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 RBM15Q96T37 977 aaKnown RBP eCLIP10.25□□□□□ -0.77
USP39-214ENST00000474572 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 PPCSQ9HAB8 311 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 FETUBQ9UGM5 382 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 ZMYND8Q9ULU4 1186 aaPredicted RBP10.25□□□□□ -0.77
USP39-214ENST00000474572 GIT1Q9Y2X7 761 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 ACTL7BQ9Y614 415 aa10.25□□□□□ -0.77
USP39-214ENST00000474572 NLRC5Q86WI3 1866 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 A0A087WUV0 522 aaPredicted RBP10.24□□□□□ -0.77
USP39-214ENST00000474572 TLDC2A0PJX2 215 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 BCLAF3A2AJT9 711 aaKnown RBP10.24□□□□□ -0.77
USP39-214ENST00000474572 CFAP69A5D8W1 941 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 GMNCA6NCL1 334 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 E7EVH7 732 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 NDUFAB1O14561 156 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 ZNF623O75123 536 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 CDH16O75309 829 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 GRAP2O75791 330 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 CHRNA1P02708 482 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 CHN1P15882 459 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 ADORA2BP29275 332 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 CTCFP49711 727 aaPredicted RBP10.24□□□□□ -0.77
USP39-214ENST00000474572 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 LONRF1Q17RB8 773 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 ANKRD20A8PQ5CZ79 823 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 CXCL17Q6UXB2 119 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 CENPUQ71F23 418 aa10.24□□□□□ -0.77
USP39-214ENST00000474572 SPATS2Q86XZ4 545 aaKnown RBP10.24□□□□□ -0.77
USP39-214ENST00000474572 PSTKQ8IV42 348 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms