RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 NUP93Q8N1F7 819 aa23.32■■□□□ 1.32
HMG20B-207ENST00000461099 B3GALNT2Q8NCR0 500 aa23.32■■□□□ 1.32
HMG20B-207ENST00000461099 CCDC127Q96BQ5 260 aa23.32■■□□□ 1.32
HMG20B-207ENST00000461099 CGRRF1Q99675 332 aa23.32■■□□□ 1.32
HMG20B-207ENST00000461099 TRIM9Q9C026 710 aa23.32■■□□□ 1.32
HMG20B-207ENST00000461099 AGPAT3Q9NRZ7 376 aa23.32■■□□□ 1.32
HMG20B-207ENST00000461099 BCCIPQ9P287 314 aaKnown RBP eCLIP23.32■■□□□ 1.32
HMG20B-207ENST00000461099 A8MXQ7 604 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.31■■□□□ 1.32
HMG20B-207ENST00000461099 ADAM23O75077 832 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 RTN3O95197 1032 aaPredicted RBP23.31■■□□□ 1.32
HMG20B-207ENST00000461099 KDSRQ06136 332 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 BYSLQ13895 437 aaKnown RBP23.31■■□□□ 1.32
HMG20B-207ENST00000461099 SPDYCQ5MJ68 293 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 LY6G5CQ5SRR4 150 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 SYT12Q8IV01 421 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 FRMD1Q8N878 549 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 PDZD8Q8NEN9 1154 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 HMGB4Q8WW32 186 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 OVCA2Q8WZ82 227 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 OTUB2Q96DC9 234 aa23.31■■□□□ 1.32
HMG20B-207ENST00000461099 NUSAP1Q9BXS6 441 aaKnown RBP23.31■■□□□ 1.32
HMG20B-207ENST00000461099 MBD1Q9UIS9 605 aaPredicted RBP23.31■■□□□ 1.32
HMG20B-207ENST00000461099 RALYQ9UKM9 306 aaKnown RBP23.31■■□□□ 1.32
HMG20B-207ENST00000461099 COCHO43405 550 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 STAU1O95793 577 aaKnown RBP23.3■■□□□ 1.32
HMG20B-207ENST00000461099 SPINK2P20155 84 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 PTGER3P43115 390 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 CYP2J2P51589 502 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 AMPD3Q01432 767 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 TRPC3Q13507 836 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 E2F4Q16254 413 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 MAP7D1Q3KQU3 841 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 ARMCX6Q7L4S7 300 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 PHTF2Q8N3S3 785 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 KDF1Q8NAX2 398 aaPredicted RBP23.3■■□□□ 1.32
HMG20B-207ENST00000461099 ZNF516Q92618 1163 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 FBXO32Q969P5 355 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 ZFRQ96KR1 1074 aaKnown RBP23.3■■□□□ 1.32
HMG20B-207ENST00000461099 CUEDC2Q9H467 287 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 ZDHHC4Q9NPG8 344 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 TMEM74BQ9NUR3 256 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 NXF1Q9UBU9 619 aaKnown RBP23.3■■□□□ 1.32
HMG20B-207ENST00000461099 CHORDC1Q9UHD1 332 aaPredicted RBP23.3■■□□□ 1.32
HMG20B-207ENST00000461099 ZMIZ1Q9ULJ6 1067 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 GON4LQ3T8J9 2241 aa23.3■■□□□ 1.32
HMG20B-207ENST00000461099 ASCC3Q8N3C0 2202 aaKnown RBP23.3■■□□□ 1.32
HMG20B-207ENST00000461099 CLIC2O15247 247 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 TOP3BO95985 862 aaKnown RBP23.29■■□□□ 1.32
HMG20B-207ENST00000461099 ATICP31939 592 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 NASPP49321 788 aaPredicted RBP23.29■■□□□ 1.32
HMG20B-207ENST00000461099 MYL6P60660 151 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 SNRPFP62306 86 aaKnown RBP23.29■■□□□ 1.32
HMG20B-207ENST00000461099 ASIC1P78348 528 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 GAD2Q05329 585 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 FAM26FQ5R3K3 315 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 HECTD3Q5T447 861 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 CNNM4Q6P4Q7 775 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 PGBD3Q8N328 593 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 XXYLT1Q8NBI6 393 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 DEFB124Q8NES8 71 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 KCNV2Q8TDN2 545 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 KCNK16Q96T55 309 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 ADAM33Q9BZ11 813 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 XYLT2Q9H1B5 865 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 ZSCAN16Q9H4T2 348 aaPredicted RBP23.29■■□□□ 1.32
HMG20B-207ENST00000461099 MTMR6Q9Y217 621 aa23.29■■□□□ 1.32
HMG20B-207ENST00000461099 MYO18AQ92614 2054 aaKnown RBP23.29■■□□□ 1.32
HMG20B-207ENST00000461099 SPEGQ15772 3267 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 TCRBV21S2A2A0A5A6 115 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 TBC1D3BA6NDS4 549 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 DPP6P42658 865 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 STK38Q15208 465 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 PREPLQ4J6C6 727 aaPredicted RBP23.28■■□□□ 1.32
HMG20B-207ENST00000461099 SNX30Q5VWJ9 437 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 BTBD8Q5XKL5 378 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 ETFBKMTQ8IXQ9 262 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 NAT16Q8N8M0 369 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 SCAMP5Q8TAC9 235 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 SYAP1Q96A49 352 aaPredicted RBP23.28■■□□□ 1.32
HMG20B-207ENST00000461099 SCNM1Q9BWG6 230 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 GZF1Q9H116 711 aaPredicted RBP23.28■■□□□ 1.32
HMG20B-207ENST00000461099 PILRBQ9UKJ0 227 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 TNRC6BQ9UPQ9 1833 aaKnown RBP23.28■■□□□ 1.32
HMG20B-207ENST00000461099 CACNA1GO43497 2377 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 FAM208BQ5VWN6 2430 aa23.28■■□□□ 1.32
HMG20B-207ENST00000461099 PLXND1Q9Y4D7 1925 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 PI4KAP42356 2102 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 AKAP13Q12802 2813 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 HOXC11O43248 304 aaPredicted RBP23.27■■□□□ 1.32
HMG20B-207ENST00000461099 ENGP17813 658 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 MAPK8P45983 427 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 LYSMD4Q5XG99 296 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 SLC23A3Q6PIS1 610 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 TRMT11Q7Z4G4 463 aaKnown RBP23.27■■□□□ 1.32
HMG20B-207ENST00000461099 NELFCDQ8IXH7 590 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 LINC00301Q8NCQ3 95 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 SCFD1Q8WVM8 642 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 DHX58Q96C10 678 aa23.27■■□□□ 1.32
HMG20B-207ENST00000461099 DUSP9Q99956 384 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms