RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 MIB1Q86YT6 1006 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 VSTM4Q8IW00 320 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 DIS3L2Q8IYB7 885 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CAMKK1Q8N5S9 505 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF596Q8TC21 504 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 GIPC3Q8TF64 312 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 FAM216AQ8WUB2 273 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ATP2A3Q93084 1043 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SARGQ9BW04 601 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CAB39LQ9H9S4 337 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CERS4Q9HA82 394 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PPANQ9NQ55 473 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PPP1R14DQ9NXH3 145 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 MPP6Q9NZW5 540 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF229Q9UJW7 825 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 AGO2Q9UKV8 859 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 AKT3Q9Y243 479 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PCDHGB2Q9Y5G2 931 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PCDHGA10Q9Y5H3 936 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 A0A0U1RQK1 487 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 POTEB3A0JP26 581 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF320A2RRD8 509 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 DENND3A2RUS2 1198 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PGRMC1O00264 195 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 AREL1O15033 823 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 STX10O60499 249 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CSF1RP07333 972 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CTRB1P17538 263 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 DDIT3P35638 169 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SLC15A1P46059 708 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TAP2Q03519 686 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ABRQ12979 859 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 STX3Q13277 289 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 DCTN2Q13561 401 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 LDLRAP1Q5SW96 308 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CTRB2Q6GPI1 263 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PAPD4Q6PIY7 484 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 POTEBQ6S5H4 581 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ARMCX2Q7L311 632 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 RAB11FIP2Q7L804 512 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PAGE2Q7Z2X7 111 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 BNIPLQ7Z465 357 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 LRRC8AQ8IWT6 810 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PRSS58Q8IYP2 241 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 VANGL1Q8TAA9 524 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TPD52L3Q96J77 140 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 STRBPQ96SI9 672 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CINPQ9BW66 212 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SLC39A10Q9ULF5 831 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SNX9Q9Y5X1 595 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 AK9Q5TCS8 1911 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 A0A0J9YVX5 310 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ABHD14A-ACY1A0A1B0GW23 586 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CFAP99D6REC4 459 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 AKAP8O43823 692 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 NOL3O60936 208 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 BEST1O76090 585 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 POU2F2P09086 479 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 GNAO1P09471 354 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SRGAP2CP0DJJ0 459 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 MCF2P10911 925 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CCR1P32246 355 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 DHPSP49366 369 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 IRAK1P51617 712 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF75DP51815 510 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 CYP4F2P78329 520 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 UBE3AQ05086 875 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF267Q14586 743 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ATAD3BQ5T9A4 648 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 HES5Q5TA89 166 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 NXPE4Q6UWF7 544 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 MB21D1Q8N884 522 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 OR4D6Q8NGJ1 314 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PXYLP1Q8TE99 480 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 SCFD1Q8WVM8 642 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TINAGL1Q9GZM7 467 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ABCB9Q9NP78 766 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ARHGAP28Q9P2N2 729 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 PSMC3IPQ9P2W1 217 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 RUVBL1Q9Y265 456 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TNFSF13BQ9Y275 285 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ASB4Q9Y574 426 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF536O15090 1300 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 TTC21AQ8NDW8 1320 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 A6NL46 340 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 HSBP1L1C9JCN9 74 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 E9PBE3 544 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 INPPL1O15357 1258 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 B4GAT1O43505 415 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 MAN1A2O60476 641 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ALDH1A2O94788 518 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 HAUS5O94927 633 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 C6P13671 934 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 HNF1AP20823 631 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 BCAMP50895 628 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 HSD17B4P51659 736 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 KCNC4Q03721 635 aa5.56□□□□□ -1.52
PTPN4-203ENST00000430976 MVPQ14764 893 aaKnown RBP5.56□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF805Q5CZA5 627 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms