RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 CASP4P49662 377 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 VAMP7P51809 220 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 MYL6P60660 151 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 TNNC1P63316 161 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 STIM1Q13586 685 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 VEPH1Q14D04 833 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 NFIL3Q16649 462 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 SOWAHAQ2M3V2 549 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 MGAT5BQ3V5L5 792 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 ZNF658Q5TYW1 1059 aaPredicted RBP8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 INTS8Q75QN2 995 aaKnown RBP8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 MTSS1LQ765P7 747 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 BMP8AQ7Z5Y6 402 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 DNAJB7Q7Z6W7 309 aaPredicted RBP8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 LRRTM3Q86VH5 581 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 ADGRF2Q8IZF7 708 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 RSAD2Q8WXG1 361 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 ING5Q8WYH8 240 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 SYAP1Q96A49 352 aaPredicted RBP8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 MCRS1Q96EZ8 462 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 SEPT5Q99719 369 aaPredicted RBP8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 TSG101Q99816 390 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 RTP3Q9BQQ7 232 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 GPR88Q9GZN0 384 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 SNX25Q9H3E2 840 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 ABI2Q9NYB9 513 aaPredicted RBP8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 CEP72Q9P209 647 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 FBXL21Q9UKT6 434 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 YIPF1Q9Y548 306 aa8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 SPTBN5Q9NRC6 3674 aaKnown RBP8.09□□□□□ -1.11
AC012560.1-202ENST00000421324 LRRIQ3A6PVS8 624 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 ANHXE9PGG2 379 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 GABRDO14764 452 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 CETN3O15182 167 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 VNN2O95498 520 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 C4BPAP04003 597 aaKnown RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 PDGFRBP09619 1106 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 HAPLN1P10915 354 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 P4HA1P13674 534 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 NPR3P17342 541 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 WARSP23381 471 aaKnown RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 ACAT1P24752 427 aaKnown RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 GNL1P36915 607 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 PPP1R2P41236 205 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 PRCPP42785 496 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 CDR1P51861 262 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 UBE2HP62256 183 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 RPL10AP62906 217 aaKnown RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 HTR4Q13639 388 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 MAPRE1Q15691 268 aaKnown RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SLC5A9Q2M3M2 681 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SGSM1Q2NKQ1 1148 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 EDRF1Q3B7T1 1238 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 ZNF667Q5HYK9 610 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SCARA3Q6AZY7 606 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 PARM1Q6UWI2 310 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 ATCAYQ86WG3 371 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SPATA2LQ8IUW3 424 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SUGP1Q8IWZ8 645 aaKnown RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 DMRTC2Q8IXT2 367 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 FAM186BQ8IYM0 893 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SMYD4Q8IYR2 804 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 OR13H1Q8NG92 308 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 OR6B3Q8NGW1 331 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SPATA20Q8TB22 786 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 PLEKHO2Q8TD55 490 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 ERCC4Q92889 916 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SMG9Q9H0W8 520 aaKnown RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 MFSD1Q9H3U5 465 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 MAGEC2Q9UBF1 373 aaPredicted RBP8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 GTF3C4Q9UKN8 822 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 CDH9Q9ULB4 789 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 NUMBLQ9Y6R0 609 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 XIRP2A4UGR9 3374 aa8.08□□□□□ -1.12
AC012560.1-202ENST00000421324 SCN1AP35498 2009 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 MYBPHLA2RUH7 354 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 PSMA7O14818 248 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 STX10O60499 249 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 ADAM23O75077 832 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 TACC1O75410 805 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 SOAT2O75908 522 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 AKAP3O75969 853 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 SRFP11831 508 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 LMO2P25791 158 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 EPHA5P54756 1037 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 DLG4P78352 724 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 FKBP3Q00688 224 aaKnown RBP8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 ENPEPQ07075 957 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 ZNF699Q32M78 642 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 ZACNQ401N2 412 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 ZCWPW2Q504Y3 356 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 ARHGAP15Q53QZ3 475 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 COBLL1Q53SF7 1204 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 PRSS36Q5K4E3 855 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 TDRD10Q5VZ19 366 aaKnown RBP8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 ISM2Q6H9L7 571 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 C4orf50Q6ZRC1 276 aa8.07□□□□□ -1.12
AC012560.1-202ENST00000421324 LIMS2Q7Z4I7 341 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms