RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 YWHAGP61981 247 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX56-203ENST00000421223 ROR1Q01973 937 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 MORF4L2Q15014 288 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 FAM110CQ1W6H9 321 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 CCDC14Q49A88 953 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 TTC13Q8NBP0 860 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 FBXO36Q8NEA4 188 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 SLC2A14Q8TDB8 520 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 CPT1BQ92523 772 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 KAT2BQ92831 832 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 NKD2Q969F2 451 aaPredicted RBP11.44□□□□□ -0.58
DDX56-203ENST00000421223 FAF2Q96CS3 445 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 TMEM109Q9BVC6 243 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 C12orf65Q9H3J6 166 aaKnown RBP11.44□□□□□ -0.58
DDX56-203ENST00000421223 ALG13Q9NP73 1137 aaKnown RBP11.44□□□□□ -0.58
DDX56-203ENST00000421223 MORF4L1Q9UBU8 362 aa11.44□□□□□ -0.58
DDX56-203ENST00000421223 DICER1Q9UPY3 1922 aaKnown RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 SMIM28A0A1B0GU29 152 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 A0A1W2PPM1 405 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 SPTLC1O15269 473 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 PAPSS1O43252 624 aaPredicted RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 GPR32O75388 356 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 DARSP14868 501 aaKnown RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 CA4P22748 312 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 ARL4CP56559 192 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 SEPT7Q16181 437 aaKnown RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 DCAF4L1Q3SXM0 396 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 FBXO47Q5MNV8 452 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 C9orf57Q5W0N0 161 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 MFSD5Q6N075 450 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 PRCCQ92733 491 aaPredicted RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 ZNF317Q96PQ6 595 aaPredicted RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 OSBPL7Q9BZF2 842 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 RSAD1Q9HA92 442 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 GGA2Q9UJY4 613 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 MGAMO43451 1857 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 MEIS3P2A8K0S8 358 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 FGFR1P11362 822 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 SNX17Q15036 470 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 KYAT1Q16773 422 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 YTHDF3Q7Z739 585 aaKnown RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 FAM131BQ86XD5 332 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 MAP7D3Q8IWC1 876 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 CTAGE3PQ8IX95 158 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 PPIL6Q8IXY8 311 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 PDIK1LQ8N165 341 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 CMASQ8NFW8 434 aaPredicted RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 CFAP36Q96G28 342 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 SNX27Q96L92 541 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 TGS1Q96RS0 853 aaKnown RBP11.43□□□□□ -0.58
DDX56-203ENST00000421223 TRABDQ9H4I3 376 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 TRIP11Q15643 1979 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 NRCAMQ92823 1304 aa11.43□□□□□ -0.58
DDX56-203ENST00000421223 COL1A2P08123 1366 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 RBM47A0AV96 593 aaKnown RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 KPNA7A9QM74 516 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 APOC4-APOC2K7ER74 178 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 TMEM63AO94886 807 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 APOC2P02655 101 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 APRTP07741 180 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 RBL1P28749 1068 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 PSEN2P49810 448 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 DPYSL3Q14195 570 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 BSPRYQ5W0U4 402 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 APBB1IPQ7Z5R6 666 aaPredicted RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 CCDC110Q8TBZ0 833 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 FNIP1Q8TF40 1166 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 MED10Q9BTT4 135 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 SNRNP25Q9BV90 132 aaKnown RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 IGF2BP3O00425 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
DDX56-203ENST00000421223 HUS1O60921 280 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 ZBED1O96006 694 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 NEFHP12036 1026 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 DESP17661 470 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 SLC6A3Q01959 620 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 SOX4Q06945 474 aaPredicted RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 INCA1Q0VD86 236 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 APPL2Q8NEU8 664 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 FBF1Q8TES7 1133 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 EMID1Q96A84 441 aaPredicted RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 CEP41Q9BYV8 373 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 NSRP1Q9H0G5 558 aaKnown RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 TMPRSS4Q9NRS4 437 aa11.42□□□□□ -0.58
DDX56-203ENST00000421223 PIH1D1Q9NWS0 290 aaKnown RBP11.42□□□□□ -0.58
DDX56-203ENST00000421223 A0A0G2JMZ2 1700 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 LOC102724159A0A0B4J2E5 919 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 A6NJR5 290 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 DNM1LO00429 736 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 MAP2K5Q13163 448 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 NME3Q13232 169 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 PWP2Q15269 919 aaKnown RBP11.41□□□□□ -0.58
DDX56-203ENST00000421223 GNASQ5JWF2 1037 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 C6orf89Q6UWU4 347 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 PYROXD2Q8N2H3 581 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.41□□□□□ -0.58
DDX56-203ENST00000421223 LPPQ93052 612 aa11.41□□□□□ -0.58
DDX56-203ENST00000421223 SMC6Q96SB8 1091 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms