RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FAM172AQ8WUF8 416 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 CPT1BQ92523 772 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 ZNF560Q96MR9 790 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 LPIN3Q9BQK8 851 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 KPNA7A9QM74 516 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 ALOX15BO15296 676 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 XPOTO43592 962 aaKnown RBP21.13■□□□□ 0.97
VSX1-202ENST00000376709 ENDOD1O94919 500 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 VIMP08670 466 aaKnown RBP21.13■□□□□ 0.97
VSX1-202ENST00000376709 PDGFRBP09619 1106 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 CTGFP29279 349 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 ZC3H18Q86VM9 953 aaKnown RBP21.13■□□□□ 0.97
VSX1-202ENST00000376709 SOCS4Q8WXH5 440 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 DPYSL4O14531 572 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 PAPSS1O43252 624 aaPredicted RBP21.12■□□□□ 0.97
VSX1-202ENST00000376709 HCRTO43612 131 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 ADORA2BP29275 332 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 ARL4CP56559 192 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 ROR1Q01973 937 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 BOLA3Q53S33 107 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 DARS2Q6PI48 645 aaKnown RBP21.12■□□□□ 0.97
VSX1-202ENST00000376709 C6orf89Q6UWU4 347 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 NPNTQ6UXI9 565 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 LRRC34Q8IZ02 419 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 B3GNT5Q9BYG0 378 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 RASA4BC9J798 803 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 POC1B-GALNT4F8VUJ3 575 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 PIRO00625 290 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 RASA4O43374 803 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 CCDC130P13994 396 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 GNL1P36915 607 aaPredicted RBP21.12■□□□□ 0.97
VSX1-202ENST00000376709 BASP1P80723 227 aaKnown RBP21.12■□□□□ 0.97
VSX1-202ENST00000376709 PDK2Q15119 407 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 NOMO1Q15155 1222 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 ANKRD22Q5VYY1 191 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 ARHGAP17Q68EM7 881 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 ZDHHC17Q8IUH5 632 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 ANKMY2Q8IV38 441 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 STK32AQ8WU08 396 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 KATNAL1Q9BW62 490 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 RNF39Q9H2S5 420 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 SNX25Q9H3E2 840 aa21.12■□□□□ 0.97
VSX1-202ENST00000376709 C17orf102A2RUQ5 167 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 BANF1O75531 89 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 PNPLA4P41247 253 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 ADCY1Q08828 1119 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 BST2Q10589 180 aaKnown RBP21.11■□□□□ 0.97
VSX1-202ENST00000376709 FSCN1Q16658 493 aaKnown RBP21.11■□□□□ 0.97
VSX1-202ENST00000376709 CCDC121Q6ZUS5 278 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 NAT8LQ8N9F0 302 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 KBTBD7Q8WVZ9 684 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 RNF157Q96PX1 679 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 GOLGA2P5Q9HBQ8 144 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 MLXIPLQ9NP71 852 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 GPATCH2LQ9NWQ4 482 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 EURLQ9NYK6 297 aa21.11■□□□□ 0.97
VSX1-202ENST00000376709 FAM155AB1AL88 458 aaPredicted RBP21.1■□□□□ 0.97
VSX1-202ENST00000376709 IGHA2P01877 340 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 STIP1P31948 543 aaKnown RBP21.1■□□□□ 0.97
VSX1-202ENST00000376709 BCAT1P54687 386 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 INHBEP58166 350 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 GAD2Q05329 585 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 CCDC142Q17RM4 750 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 ZC3H12AQ5D1E8 599 aaKnown RBP21.1■□□□□ 0.97
VSX1-202ENST00000376709 C1orf228Q6PIY5 440 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 APPL2Q8NEU8 664 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 DNAI2Q9GZS0 605 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 NSRP1Q9H0G5 558 aaKnown RBP21.1■□□□□ 0.97
VSX1-202ENST00000376709 SAMD15Q9P1V8 674 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 ACTL7BQ9Y614 415 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 H7C0C1 242 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 SPTLC1O15269 473 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 LMO2P25791 158 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 ATP5OP48047 213 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 TAF6P49848 677 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 CRYBB1P53674 252 aaPredicted RBP21.1■□□□□ 0.97
VSX1-202ENST00000376709 PACS2Q86VP3 889 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 ANKS4BQ8N8V4 417 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 ANKRD52Q8NB46 1076 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 CCDC197Q8NCU1 140 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 TRPV1Q8NER1 839 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 PYROXD1Q8WU10 500 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 TEKT4Q8WW24 435 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 KHSRPQ92945 711 aaKnown RBP eCLIP21.1■□□□□ 0.97
VSX1-202ENST00000376709 ZIC5Q96T25 663 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 TBCBQ99426 244 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 NKIRAS1Q9NYS0 192 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 IPPQ9Y573 584 aa21.1■□□□□ 0.97
VSX1-202ENST00000376709 MYADML2A6NDP7 307 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 CPP00450 1065 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 FGFR1P11362 822 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 KCNE1P15382 129 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 NR1H3Q13133 447 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 SV2CQ496J9 727 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 FNBP1LQ5T0N5 605 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 UBXN11Q5T124 520 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 SNRNP25Q9BV90 132 aaKnown RBP21.09■□□□□ 0.97
VSX1-202ENST00000376709 PHACTR1Q9C0D0 580 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 GDAP2Q9NXN4 497 aa21.09■□□□□ 0.97
VSX1-202ENST00000376709 XPO7Q9UIA9 1087 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms