RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FNBP1LQ5T0N5 605 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 TSHZ1Q6ZSZ6 1077 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 TRIM74Q86UV6 250 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 TRIM73Q86UV7 250 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 ANKS4BQ8N8V4 417 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 LGMNQ99538 433 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 C16orf70Q9BSU1 422 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 FZD8Q9H461 694 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 ADGRA2Q96PE1 1338 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 MYADML2A6NDP7 307 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
CXCL12-203ENST00000374429 TOP3BO95985 862 aaKnown RBP11.28□□□□□ -0.6
CXCL12-203ENST00000374429 MMP3P08254 477 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-203ENST00000374429 GBE1Q04446 702 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 MROH9Q5TGP6 573 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 MICALCLQ6ZW33 695 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 ARFGAP1Q8N6T3 406 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 PAF1Q8N7H5 531 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 PNPLA1Q8N8W4 532 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 FBF1Q8TES7 1133 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 CELF6Q96J87 481 aaKnown RBP11.28□□□□□ -0.6
CXCL12-203ENST00000374429 OSBPL7Q9BZF2 842 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 EPB41L4BQ9H329 900 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 TPX2Q9ULW0 747 aaKnown RBP11.28□□□□□ -0.6
CXCL12-203ENST00000374429 GPD1P21695 349 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 KDELR1P24390 212 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 RPL22P35268 128 aaKnown RBP11.27□□□□□ -0.6
CXCL12-203ENST00000374429 RTP1P59025 263 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.6
CXCL12-203ENST00000374429 NOL9Q5SY16 702 aaKnown RBP11.27□□□□□ -0.6
CXCL12-203ENST00000374429 FAM117BQ6P1L5 589 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 TRIM72Q6ZMU5 477 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 PLPPR4Q7Z2D5 763 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 VSIG1Q86XK7 387 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 XYLT1Q86Y38 959 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 PDIK1LQ8N165 341 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 CCDC197Q8NCU1 140 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 EXD1Q8NHP7 514 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 ART4Q93070 314 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 PEBP4Q96S96 227 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 ABCF3Q9NUQ8 709 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 TNFSF13BQ9Y275 285 aa11.27□□□□□ -0.6
CXCL12-203ENST00000374429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-203ENST00000374429 FAM107AO95990 144 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 HMBSP08397 361 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 RPSAP08865 295 aaKnown RBP11.27□□□□□ -0.61
CXCL12-203ENST00000374429 CYP3A5P20815 502 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 EIF4BP23588 611 aaKnown RBP11.27□□□□□ -0.61
CXCL12-203ENST00000374429 FNTAP49354 379 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 USP50Q70EL3 339 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-203ENST00000374429 CENPUQ71F23 418 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 BEST2Q8NFU1 509 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 PPP1R14CQ8TAE6 165 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 SLC7A14Q8TBB6 771 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 BHMTQ93088 406 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 SMC6Q96SB8 1091 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 PITPNM3Q9BZ71 974 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 TRABDQ9H4I3 376 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 LRRC19Q9H756 370 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 SMYD2Q9NRG4 433 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 ASNSD1Q9NWL6 643 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 hCG_1818297A0A087WSY0 165 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-203ENST00000374429 SPTLC1O15269 473 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 ATP9BO43861 1147 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 OR4Q2P0C623 313 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 EDNRBP24530 442 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 PBX3P40426 434 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 ELK3P41970 407 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 MSH2P43246 934 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 ROR1Q01973 937 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 HIC1Q14526 733 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 CCNG2Q16589 344 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 TTC30AQ86WT1 665 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 ZNF677Q86XU0 584 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 C3orf20Q8ND61 904 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 RUNDC3BQ96NL0 473 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 SHCBP1LQ9BZQ2 653 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 ATXN3LQ9H3M9 355 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 ABHD16BQ9H3Z7 469 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 GON4LQ3T8J9 2241 aa11.27□□□□□ -0.61
CXCL12-203ENST00000374429 M0QZ92 97 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 IGF2BP3O00425 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
CXCL12-203ENST00000374429 MEFVO15553 781 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-203ENST00000374429 CPP00450 1065 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 TPH1P17752 444 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 MAN1A1P33908 653 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 SCNN1GP51170 649 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 EIF3BP55884 814 aaKnown RBP11.26□□□□□ -0.61
CXCL12-203ENST00000374429 SOX4Q06945 474 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-203ENST00000374429 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 PHF13Q86YI8 300 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-203ENST00000374429 APPL2Q8NEU8 664 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 MAIP1Q8WWC4 291 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 FAM136AQ96C01 138 aa11.26□□□□□ -0.61
CXCL12-203ENST00000374429 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms