RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 MTERF2Q49AM1 385 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 RNASE12Q5GAN4 147 aaKnown RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 LDLRAD1Q5T700 205 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 KHDRBS2Q5VWX1 349 aaKnown RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 TAF2Q6P1X5 1199 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 GDPD4Q6W3E5 623 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 RSRC2Q7L4I2 434 aaKnown RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 NOP9Q86U38 636 aaKnown RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 ADIPOR2Q86V24 386 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 LYSMD2Q8IV50 215 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 KLHDC8BQ8IXV7 354 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 SIRT6Q8N6T7 355 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 PRR26Q8N8Z3 221 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 AMER3Q8N944 861 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 ZNF610Q8N9Z0 462 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 ANKRD52Q8NB46 1076 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 TMIEQ8NEW7 156 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 CCHCR1Q8TD31 782 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 TAS1R2Q8TE23 839 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 HOXB13Q92826 284 aaPredicted RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 GLG1Q92896 1179 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 SCAMP4Q969E2 229 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 FATE1Q969F0 183 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 LRIG1Q96JA1 1093 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 HIC2Q96JB3 615 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 ZNF599Q96NL3 588 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 SLC46A1Q96NT5 459 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 LENG8Q96PV6 779 aaPredicted RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 PKP4Q99569 1192 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 HTATIP2Q9BUP3 242 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 SCNM1Q9BWG6 230 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 BACH2Q9BYV9 841 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 WDR13Q9H1Z4 485 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 MMP28Q9H239 520 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 GREM2Q9H772 168 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 KANSL2Q9H9L4 492 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 PELI2Q9HAT8 420 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 RPS10P5Q9NQ39 176 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 SNX15Q9NRS6 342 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 CCM2LQ9NUG4 571 aaPredicted RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 IFT57Q9NWB7 429 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 KIAA1522Q9P206 1035 aaPredicted RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 PLEKHB1Q9UF11 243 aaPredicted RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 AMFRQ9UKV5 643 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 TMPRSS11EQ9UL52 423 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 FZD10Q9ULW2 581 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 RAD54BQ9Y620 910 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 ZHX2Q9Y6X8 837 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 WDR81Q562E7 1941 aa0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 PRRC2AP48634 2157 aaKnown RBP0.38□□□□□ -2.35
RNU6-54P-201ENST00000365563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CCDC163A0A0D9SF12 145 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CLEC18AA5D8T8 446 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 KLLNB2CW77 178 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 KCNQ2O43526 872 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 OPA1O60313 960 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 SRSF10O75494 262 aaKnown RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 DNAJC8O75937 253 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 PRKD3O94806 890 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 ARIH2O95376 493 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 EGFP01133 1207 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 FGAP02671 866 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 DUX4L4P0CJ87 422 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CDC25CP30307 473 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 SLC6A4P31645 630 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CEACAM8P31997 349 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 ETFBP38117 255 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 GCLCP48506 637 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 DLK1P80370 383 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 SATB1Q01826 763 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 Q0VFX4 171 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 RIGQ13278 110 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 PEX6Q13608 980 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 UGP2Q16851 508 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 PFKFB3Q16875 520 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 UGT8Q16880 541 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CPEB4Q17RY0 729 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 TMEM30BQ3MIR4 351 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 ODF3L2Q3SX64 289 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 XKR4Q5GH76 650 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 EARS2Q5JPH6 523 aaKnown RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 ZC2HC1BQ5TFG8 222 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 DCAF12L1Q5VU92 463 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 OTUD1Q5VV17 481 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CREB3L3Q68CJ9 461 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 C8orf82Q6P1X6 216 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 LAYNQ6UX15 382 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 IGFL3Q6UXB1 125 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 FGD2Q7Z6J4 655 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 PNMA8AQ86V59 439 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 NAGSQ8N159 534 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CBARPQ8N350 705 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 FGFRL1Q8N441 504 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CELF2-AS1Q8N7Q2 184 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 POC1AQ8NBT0 407 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 CLEC18CQ8NCF0 446 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 C7orf57Q8NEG2 295 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 IL17RDQ8NFM7 739 aa0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 GRAPLQ8TC17 118 aaPredicted RBP0.37□□□□□ -2.35
RNU6-54P-201ENST00000365563 LRRC8CQ8TDW0 803 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms