RNA–Protein interactions for RNA: ENST00000321256.9

NCBP2-201, Transcript of nuclear cap binding protein subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP2, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-201ENST00000321256 GUCY1A3Q02108 690 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 KRT81Q14533 505 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 DEFB115Q30KQ5 88 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 ZC3H12AQ5D1E8 599 aaKnown RBP13.11□□□□□ -0.31
NCBP2-201ENST00000321256 CCSAPQ6IQ19 270 aaPredicted RBP13.11□□□□□ -0.31
NCBP2-201ENST00000321256 B4GALNT4Q76KP1 1039 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 ZDHHC17Q8IUH5 632 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 BBOF1Q8ND07 529 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 C3orf58Q8NDZ4 430 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 CCHCR1Q8TD31 782 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 SENP8Q96LD8 212 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 DNAI2Q9GZS0 605 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 ADAM7Q9H2U9 754 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 DPYSL4O14531 572 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 ATXN1P54253 815 aaKnown RBP13.11□□□□□ -0.31
NCBP2-201ENST00000321256 ITGA7Q13683 1181 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 DPYSL3Q14195 570 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 ZSCAN26Q16670 478 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 KYNUQ16719 465 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 MDH1BQ5I0G3 518 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 AGBL2Q5U5Z8 902 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 HIBCHQ6NVY1 386 aaPredicted RBP13.11□□□□□ -0.31
NCBP2-201ENST00000321256 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 LRRC31Q6UY01 552 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 TRMT10CQ7L0Y3 403 aaKnown RBP13.11□□□□□ -0.31
NCBP2-201ENST00000321256 FUKQ8N0W3 1084 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 TTC13Q8NBP0 860 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 NDRG1Q92597 394 aaKnown RBP13.11□□□□□ -0.31
NCBP2-201ENST00000321256 CAPNS2Q96L46 248 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
NCBP2-201ENST00000321256 DDX43Q9NXZ2 648 aaKnown RBP13.11□□□□□ -0.31
NCBP2-201ENST00000321256 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 BEST1O76090 585 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 POMCP01189 267 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 APOC2P02655 101 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 DESP17661 470 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 PTPN1P18031 435 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 HDAC4P56524 1084 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 ADIGQ0VDE8 80 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 CA9Q16790 459 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 KIAA0319Q5VV43 1072 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 SLC26A9Q7LBE3 791 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 TAB3Q8N5C8 712 aaPredicted RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 SPATA18Q8TC71 538 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 FAM149B1Q96BN6 582 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 SNRNP25Q9BV90 132 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 ADAM33Q9BZ11 813 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 TRPA1O75762 1119 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 ACADSBP45954 432 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 RABGGTBP53611 331 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 SLC8A3P57103 927 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 EIF3EP60228 445 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 C1QTNF8P60827 252 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 LPIN1Q14693 890 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 PPP6R3Q5H9R7 873 aaPredicted RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 DSTYKQ6XUX3 929 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 ZC3H18Q86VM9 953 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 RSAD2Q8WXG1 361 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 HSFY1Q96LI6 401 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 C9orf72Q96LT7 481 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 TSPYL1Q9H0U9 437 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 PCDH9Q9HC56 1237 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
NCBP2-201ENST00000321256 INPP5FQ9Y2H2 1132 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 GIT1Q9Y2X7 761 aa13.1□□□□□ -0.31
NCBP2-201ENST00000321256 GABRDO14764 452 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 RASGRF2O14827 1237 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 XPO1O14980 1071 aaKnown RBP13.09□□□□□ -0.31
NCBP2-201ENST00000321256 MCF2LO15068 1137 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 EIF3HO15372 352 aaKnown RBP eCLIP13.09□□□□□ -0.31
NCBP2-201ENST00000321256 RGS16O15492 202 aaPredicted RBP13.09□□□□□ -0.31
NCBP2-201ENST00000321256 ENDOD1O94919 500 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 TTC4O95801 387 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 NPR3P17342 541 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 CST5P28325 142 aaPredicted RBP13.09□□□□□ -0.31
NCBP2-201ENST00000321256 NRLP54845 237 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 LONRF1Q17RB8 773 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 FAM182AQ5T1J6 154 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 PAQR9Q6ZVX9 377 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 MAP7D3Q8IWC1 876 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 UNC45BQ8IWX7 931 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 ZCCHC9Q8N567 271 aaKnown RBP13.09□□□□□ -0.31
NCBP2-201ENST00000321256 FAM71DQ8N9W8 422 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 RBM15Q96T37 977 aaKnown RBP eCLIP13.09□□□□□ -0.31
NCBP2-201ENST00000321256 ADAM2Q99965 735 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 DUSP16Q9BY84 665 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 NINJ2Q9NZG7 142 aa13.09□□□□□ -0.31
NCBP2-201ENST00000321256 SRRDQ9UH36 339 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms