RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 C1orf228Q6PIY5 440 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 FAM43BQ6ZT52 329 aaPredicted RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 CTU1Q7Z7A3 348 aaKnown RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 ZC3H18Q86VM9 953 aaKnown RBP14.21□□□□□ -0.13
VMP1-201ENST00000262291 MDM1Q8TC05 714 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 FAM172AQ8WUF8 416 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 SLC35F5Q8WV83 523 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 FAM105AQ9NUU6 356 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 COX16Q9P0S2 106 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 WHRNQ9P202 907 aa14.21□□□□□ -0.13
VMP1-201ENST00000262291 CYB561D2O14569 222 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 HUS1O60921 280 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 BEST1O76090 585 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 FSBPO95073 299 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 KRT7P08729 469 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 KCNE1P15382 129 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 SCNN1GP51170 649 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 CLNS1AP54105 237 aaKnown RBP14.21□□□□□ -0.14
VMP1-201ENST00000262291 TAF2Q6P1X5 1199 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 RHBDF2Q6PJF5 856 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 CYP4V2Q6ZWL3 525 aaPredicted RBP14.21□□□□□ -0.14
VMP1-201ENST00000262291 NETO2Q8NC67 525 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 SPC25Q9HBM1 224 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 ASNSD1Q9NWL6 643 aa14.21□□□□□ -0.14
VMP1-201ENST00000262291 TMEM88BA6NKF7 163 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 HMGB1P1B2RPK0 211 aaPredicted RBP14.2□□□□□ -0.14
VMP1-201ENST00000262291 MGEA5O60502 916 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 POMCP01189 267 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 ITIH2P19823 946 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 CLCNKBP51801 687 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 SEC24CP53992 1094 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 IFT88Q13099 833 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 KIAA0319Q5VV43 1072 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 NME8Q8N427 588 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 C3orf58Q8NDZ4 430 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 GSTCDQ8NEC7 633 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 CNPY3Q9BT09 278 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 CTNNAL1Q9UBT7 734 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 DDX20Q9UHI6 824 aaKnown RBP14.2□□□□□ -0.14
VMP1-201ENST00000262291 INPP5FQ9Y2H2 1132 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 SEPT4O43236 478 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 RARGP13631 454 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 VCPP55072 806 aaKnown RBP14.2□□□□□ -0.14
VMP1-201ENST00000262291 SLC6A3Q01959 620 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 PTGISQ16647 500 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 PPP6R3Q5H9R7 873 aaPredicted RBP14.2□□□□□ -0.14
VMP1-201ENST00000262291 CCDC13Q8IYE1 715 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 FNIP1Q8TF40 1166 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 ADAM7Q9H2U9 754 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 KIAA1257Q9ULG3 409 aa14.2□□□□□ -0.14
VMP1-201ENST00000262291 RALGAPA2Q2PPJ7 1873 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 PRPSAP2O60256 369 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 MYCP01106 439 aaPredicted RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 NDUFV1P49821 464 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 CCNHP51946 323 aaPredicted RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 SF3A3Q12874 501 aaKnown RBP eCLIP14.19□□□□□ -0.14
VMP1-201ENST00000262291 FASTKD3Q14CZ7 662 aaKnown RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 UNC45BQ8IWX7 931 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 ALLCQ8N6M5 410 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 CCDC89Q8N998 374 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 SLC4A5Q9BY07 1137 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 SENP6Q9GZR1 1112 aaPredicted RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 GPBP1L1Q9HC44 474 aaPredicted RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 HOMER3Q9NSC5 361 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 ADAMTS4O75173 837 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 PIAS1O75925 651 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 PITX1P78337 314 aaPredicted RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 KRT81Q14533 505 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 NAA25Q14CX7 972 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 OASLQ15646 514 aaKnown RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 XKR4Q5GH76 650 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 MDH1BQ5I0G3 518 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 KDM7AQ6ZMT4 941 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 POLNQ7Z5Q5 900 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 FAM71DQ8N9W8 422 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 MRRFQ96E11 262 aaKnown RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 PPP1R10Q96QC0 940 aaKnown RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 MED10Q9BTT4 135 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 TRAIPQ9BWF2 469 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 RHOBTB2Q9BYZ6 727 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 TSPYL2Q9H2G4 693 aaPredicted RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 SLC40A1Q9NP59 571 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 TMPRSS4Q9NRS4 437 aa14.19□□□□□ -0.14
VMP1-201ENST00000262291 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.19□□□□□ -0.14
VMP1-201ENST00000262291 F8W810 466 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 SDC4P31431 198 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 IRF5Q13568 498 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 SLMAPQ14BN4 828 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 SV2CQ496J9 727 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 AGMOQ6ZNB7 445 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 SERINC5Q86VE9 423 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 B3GALNT2Q8NCR0 500 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 PADI3Q9ULW8 664 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 HEY1Q9Y5J3 304 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 ARL5CA6NH57 179 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 TRPA1O75762 1119 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 GBP1P32455 592 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms