RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TTYH3Q9C0H2 523 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 FAM49BQ9NUQ9 324 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 SIK3Q9Y2K2 1263 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 PLIN4Q96Q06 1357 aa11.41□□□□□ -0.58
COPA-201ENST00000241704 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 KRT37O76014 449 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 INSRRP14616 1297 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 PNPLA4P41247 253 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 ABL2P42684 1182 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 HSD17B4P51659 736 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 B3GNT6Q6ZMB0 384 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 SH3BP5LQ7L8J4 393 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 CDKL3Q8IVW4 592 aaPredicted RBP11.4□□□□□ -0.58
COPA-201ENST00000241704 FEZF2Q8TBJ5 459 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 SLC26A7Q8TE54 656 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 UCMAQ8WVF2 138 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 PPP1R14BQ96C90 147 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 MTMR12Q9C0I1 747 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 ENTPD7Q9NQZ7 604 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 TMEM150BA6NC51 233 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 H3BRJ5 948 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 URODP06132 367 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 ITIH2P19823 946 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 KCNA4P22459 653 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 CNPY1Q3B7I2 92 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 IZUMO3Q5VZ72 239 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 TAF2Q6P1X5 1199 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 CCNJLQ8IV13 435 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 RGPD2P0DJD1 1756 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 GJB6O95452 261 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 VAV1P15498 845 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 ITGB5P18084 799 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 ZNF235Q14590 738 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 C16orf87Q6PH81 154 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 MTDHQ86UE4 582 aaKnown RBP11.4□□□□□ -0.58
COPA-201ENST00000241704 WDR49Q8IV35 697 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 RIBC1Q8N443 379 aaPredicted RBP11.4□□□□□ -0.58
COPA-201ENST00000241704 ARL10Q8N8L6 244 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 NUF2Q9BZD4 464 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 OSBPL8Q9BZF1 889 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.58
COPA-201ENST00000241704 NKX1-2Q9UD57 310 aaPredicted RBP11.4□□□□□ -0.58
COPA-201ENST00000241704 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
COPA-201ENST00000241704 B2RBV5 119 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 H0YGN5 161 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 GPC4O75487 556 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 CCNG1P51959 295 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.59
COPA-201ENST00000241704 MAP4K3Q8IVH8 894 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 CASP10Q92851 521 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 LRGUKQ96M69 825 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.59
COPA-201ENST00000241704 DPP3Q9NY33 737 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 WDR37Q9Y2I8 494 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 MTO1Q9Y2Z2 717 aaKnown RBP11.4□□□□□ -0.59
COPA-201ENST00000241704 NFS1Q9Y697 457 aa11.4□□□□□ -0.59
COPA-201ENST00000241704 PIK3R2O00459 728 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 PEX11AO75192 247 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 KRT36O76013 467 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 KBTBD12Q3ZCT8 623 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 MIIPQ5JXC2 388 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 HYIQ5T013 277 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 DDX53Q86TM3 631 aaKnown RBP11.39□□□□□ -0.59
COPA-201ENST00000241704 TTC30BQ8N4P2 665 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 HIPK4Q8NE63 616 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 REPS2Q8NFH8 660 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 ZNF333Q96JL9 665 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 CDC42EP4Q9H3Q1 356 aaKnown RBP11.39□□□□□ -0.59
COPA-201ENST00000241704 CCDC134Q9H6E4 229 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 DDX18Q9NVP1 670 aaKnown RBP11.39□□□□□ -0.59
COPA-201ENST00000241704 STARD13Q9Y3M8 1113 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 A0A087WZ62 844 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 GOLGA8MH3BSY2 632 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 ARSEP51690 589 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 ARHGAP15Q53QZ3 475 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 CYP4A22Q5TCH4 519 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 ZPBP2Q6X784 338 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 GLIS3Q8NEA6 775 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 FDXACB1Q9BRP7 624 aaPredicted RBP11.39□□□□□ -0.59
COPA-201ENST00000241704 APOL1O14791 398 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 CLPTM1O96005 669 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 PENKP01210 267 aaPredicted RBP11.39□□□□□ -0.59
COPA-201ENST00000241704 LYNP07948 512 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 SPATA31C1P0DKV0 1188 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 ACADSBP45954 432 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 EIF3EP60228 445 aaKnown RBP11.39□□□□□ -0.59
COPA-201ENST00000241704 HIC1Q14526 733 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 TMEM132BQ14DG7 1078 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 PSMD6Q15008 389 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 MAPRE1Q15691 268 aaKnown RBP11.39□□□□□ -0.59
COPA-201ENST00000241704 IQSEC1Q6DN90 963 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 EXOC3L1Q86VI1 746 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 TINF2Q9BSI4 451 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 SPATA16Q9BXB7 569 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 PHACTR1Q9C0D0 580 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 SALL4Q9UJQ4 1053 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 BLOC1S6Q9UL45 172 aa11.39□□□□□ -0.59
COPA-201ENST00000241704 A0A0A6YYK5 440 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms