RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C PAU23Q07987 124 aa2.03□□□□□ -2.08
SSN8YNL025C PAU17Q12370 124 aa2.03□□□□□ -2.08
SSN8YNL025C YOR343CQ12484 108 aa2.03□□□□□ -2.08
SSN8YNL025C YLR285C-AQ3E771 56 aa2.03□□□□□ -2.08
SSN8YNL025C YCR095W-AQ3E787 52 aa2.03□□□□□ -2.08
SSN8YNL025C RPL33AP05744 107 aaKnown RBP2.02□□□□□ -2.09
SSN8YNL025C YGL014C-AP0C5N1 53 aa2.02□□□□□ -2.09
SSN8YNL025C YMR122CQ03879 124 aa2.02□□□□□ -2.09
SSN8YNL025C YOL131WQ08270 108 aa2.02□□□□□ -2.09
SSN8YNL025C YDR119W-AQ2V2P9 66 aa2.02□□□□□ -2.09
SSN8YNL025C YDR381C-AQ3E6R5 114 aa2.02□□□□□ -2.09
SSN8YNL025C YRF1-1P0CX20 1796 aa2.02□□□□□ -2.09
SSN8YNL025C YRF1-5P0CX21 1796 aa2.02□□□□□ -2.09
SSN8YNL025C YRF1-8P0CX22 1796 aa2.02□□□□□ -2.09
SSN8YNL025C NHP2P32495 156 aaPredicted RBP2.01□□□□□ -2.09
SSN8YNL025C SMX2P40204 77 aaKnown RBP2.01□□□□□ -2.09
SSN8YNL025C IRC21Q04772 201 aa2.01□□□□□ -2.09
SSN8YNL025C YKL065W-AQ2V2P2 73 aa2.01□□□□□ -2.09
SSN8YNL025C YPL038W-AQ3E7B4 63 aa2.01□□□□□ -2.09
SSN8YNL025C FLO9P39712 1322 aa2□□□□□ -2.09
SSN8YNL025C FPR1P20081 114 aaKnown RBP2□□□□□ -2.09
SSN8YNL025C AGA2P32781 87 aa2□□□□□ -2.09
SSN8YNL025C YBR292CP38357 123 aa2□□□□□ -2.09
SSN8YNL025C YIL163CP40448 117 aa2□□□□□ -2.09
SSN8YNL025C YOR105WQ08504 108 aa2□□□□□ -2.09
SSN8YNL025C YFL041W-AQ3E817 63 aa2□□□□□ -2.09
SSN8YNL025C UBR1P19812 1950 aa1.99□□□□□ -2.09
SSN8YNL025C BNI1P41832 1953 aa1.99□□□□□ -2.09
SSN8YNL025C YHR214C-DP0CX93 97 aa1.99□□□□□ -2.09
SSN8YNL025C YBR032WP38223 100 aa1.99□□□□□ -2.09
SSN8YNL025C VPS55P47111 140 aa1.99□□□□□ -2.09
SSN8YNL025C COX12Q01519 83 aa1.99□□□□□ -2.09
SSN8YNL025C YGL041C-BQ3E750 60 aa1.99□□□□□ -2.09
SSN8YNL025C VMA9Q3E7B6 73 aa1.99□□□□□ -2.09
SSN8YNL025C RPS22BQ3E7Y3 130 aaKnown RBP1.99□□□□□ -2.09
SSN8YNL025C YSF3P0C074 85 aaPredicted RBP1.98□□□□□ -2.09
SSN8YNL025C SPC1P46965 94 aa1.98□□□□□ -2.09
SSN8YNL025C YOR314WQ12506 109 aa1.98□□□□□ -2.09
SSN8YNL025C TAR1Q8TGM6 124 aa1.98□□□□□ -2.09
SSN8YNL025C TY4B-HP0C2J7 1802 aa1.97□□□□□ -2.09
SSN8YNL025C TY4B-JP47024 1803 aa1.97□□□□□ -2.09
SSN8YNL025C CCW14O13547 238 aa1.97□□□□□ -2.09
SSN8YNL025C MRPL38P35996 138 aaPredicted RBP1.97□□□□□ -2.09
SSN8YNL025C YPR145C-AQ2V2P0 78 aa1.97□□□□□ -2.09
SSN8YNL025C AIM19P40502 157 aa1.96□□□□□ -2.1
SSN8YNL025C MRX7P53869 86 aa1.96□□□□□ -2.1
SSN8YNL025C MIX17Q03667 156 aa1.96□□□□□ -2.1
SSN8YNL025C FAS2P19097 1887 aaKnown RBP1.95□□□□□ -2.1
SSN8YNL025C YAL065CO13511 128 aa1.95□□□□□ -2.1
SSN8YNL025C BSC4P53841 131 aa1.95□□□□□ -2.1
SSN8YNL025C PRM7Q12459 698 aa1.95□□□□□ -2.1
SSN8YNL025C YER188C-AP0C0V2 99 aa1.94□□□□□ -2.1
SSN8YNL025C PDX3P38075 228 aaKnown RBP1.94□□□□□ -2.1
SSN8YNL025C MPC2P38857 129 aa1.94□□□□□ -2.1
SSN8YNL025C YJL009WP47078 108 aa1.94□□□□□ -2.1
SSN8YNL025C YNL146C-AQ3E7Z1 64 aa1.94□□□□□ -2.1
SSN8YNL025C YNR034W-AQ3E841 98 aa1.94□□□□□ -2.1
SSN8YNL025C YIL134C-AQ45U18 67 aa1.94□□□□□ -2.1
SSN8YNL025C FKS1P38631 1876 aaKnown RBP1.94□□□□□ -2.1
SSN8YNL025C PAU1P0CE88 120 aa1.93□□□□□ -2.1
SSN8YNL025C PAU14P0CE89 120 aa1.93□□□□□ -2.1
SSN8YNL025C PAU6P0CE90 120 aa1.93□□□□□ -2.1
SSN8YNL025C PAU18P0CE91 120 aa1.93□□□□□ -2.1
SSN8YNL025C PAU8P0CE92 120 aa1.93□□□□□ -2.1
SSN8YNL025C PAU11P0CE93 120 aa1.93□□□□□ -2.1
SSN8YNL025C YBL071CP38185 102 aa1.93□□□□□ -2.1
SSN8YNL025C AIM4P38305 123 aaPredicted RBP1.93□□□□□ -2.1
SSN8YNL025C YBR219CP38317 127 aa1.93□□□□□ -2.1
SSN8YNL025C PAU13P38725 120 aa1.93□□□□□ -2.1
SSN8YNL025C YEL008WP40001 126 aa1.93□□□□□ -2.1
SSN8YNL025C PAU4P53427 120 aa1.93□□□□□ -2.1
SSN8YNL025C PAU10Q03050 120 aa1.93□□□□□ -2.1
SSN8YNL025C PAU9Q3E770 120 aa1.93□□□□□ -2.1
SSN8YNL025C COA3Q3E7B2 85 aa1.93□□□□□ -2.1
SSN8YNL025C YLR422WQ06409 1932 aa1.93□□□□□ -2.1
SSN8YNL025C MRPL31P14063 131 aaPredicted RBP1.92□□□□□ -2.1
SSN8YNL025C YNL198CP40166 100 aa1.92□□□□□ -2.1
SSN8YNL025C CCW12Q12127 133 aa1.92□□□□□ -2.1
SSN8YNL025C YIL102C-AQ2V2P5 75 aa1.92□□□□□ -2.1
SSN8YNL025C QCR9P22289 66 aa1.91□□□□□ -2.1
SSN8YNL025C YLR162WQ06235 118 aa1.91□□□□□ -2.1
SSN8YNL025C YDL012CQ12489 107 aa1.91□□□□□ -2.1
SSN8YNL025C YGR240C-AQ3E786 66 aa1.91□□□□□ -2.1
SSN8YNL025C LCL2Q08045 131 aa1.9□□□□□ -2.11
SSN8YNL025C PAU20Q08322 120 aa1.9□□□□□ -2.11
SSN8YNL025C FKS3Q04952 1785 aa1.9□□□□□ -2.11
SSN8YNL025C FPR2P32472 135 aa1.89□□□□□ -2.11
SSN8YNL025C TIM12P32830 109 aa1.89□□□□□ -2.11
SSN8YNL025C COX19Q3E731 98 aa1.89□□□□□ -2.11
SSN8YNL025C RIM15P43565 1770 aa1.89□□□□□ -2.11
SSN8YNL025C YCL042WP25572 119 aa1.88□□□□□ -2.11
SSN8YNL025C SPI1P40092 148 aa1.88□□□□□ -2.11
SSN8YNL025C YDR010CQ12426 110 aa1.88□□□□□ -2.11
SSN8YNL025C YGR121W-AQ3E816 71 aa1.88□□□□□ -2.11
SSN8YNL025C RPS11AP0CX47 156 aaKnown RBP1.87□□□□□ -2.11
SSN8YNL025C RPS11BP0CX48 156 aaKnown RBP1.87□□□□□ -2.11
SSN8YNL025C YSY6P38374 65 aa1.87□□□□□ -2.11
SSN8YNL025C YHR173CP38864 112 aa1.87□□□□□ -2.11
SSN8YNL025C YDR210WQ03482 75 aa1.87□□□□□ -2.11
SSN8YNL025C YOR072WQ08486 104 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 68 ms