RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YBL071CP38185 102 aa3.75□□□□□ -1.81
PSE1YMR308C CTR2P38865 189 aa3.75□□□□□ -1.81
PSE1YMR308C SPC1P46965 94 aa3.75□□□□□ -1.81
PSE1YMR308C RPL26BP53221 127 aaKnown RBP3.75□□□□□ -1.81
PSE1YMR308C QCR9P22289 66 aa3.74□□□□□ -1.81
PSE1YMR308C YPR153WQ06537 140 aa3.74□□□□□ -1.81
PSE1YMR308C YPR096CO13587 100 aa3.74□□□□□ -1.81
PSE1YMR308C YNR077CP53758 84 aa3.74□□□□□ -1.81
PSE1YMR308C VPS68Q12016 184 aa3.74□□□□□ -1.81
PSE1YMR308C RPS23AP0CX29 145 aaKnown RBP3.73□□□□□ -1.81
PSE1YMR308C RPS23BP0CX30 145 aa3.73□□□□□ -1.81
PSE1YMR308C SPI1P40092 148 aa3.73□□□□□ -1.81
PSE1YMR308C YGR035W-AQ45U48 73 aa3.73□□□□□ -1.81
PSE1YMR308C YLR285C-AQ3E771 56 aa3.73□□□□□ -1.81
PSE1YMR308C YPR053CQ6Q5F3 151 aa3.73□□□□□ -1.81
PSE1YMR308C MIG3P39943 394 aa3.73□□□□□ -1.81
PSE1YMR308C FLO9P39712 1322 aa3.72□□□□□ -1.81
PSE1YMR308C AIM26P32858 118 aa3.72□□□□□ -1.81
PSE1YMR308C COX23P38824 151 aa3.72□□□□□ -1.81
PSE1YMR308C AIM19P40502 157 aa3.71□□□□□ -1.81
PSE1YMR308C YDL022C-AP0C5L6 82 aa3.71□□□□□ -1.82
PSE1YMR308C YCR043CP25361 127 aa3.71□□□□□ -1.82
PSE1YMR308C YGL149WP53116 101 aa3.71□□□□□ -1.82
PSE1YMR308C MRPS8Q03799 155 aa3.71□□□□□ -1.82
PSE1YMR308C YIL156W-BQ2V2P4 73 aa3.71□□□□□ -1.82
PSE1YMR308C MRPL38P35996 138 aaPredicted RBP3.7□□□□□ -1.82
PSE1YMR308C HOT13P36078 116 aa3.7□□□□□ -1.82
PSE1YMR308C MPC2P38857 129 aa3.7□□□□□ -1.82
PSE1YMR308C ERG2P32352 222 aa3.7□□□□□ -1.82
PSE1YMR308C YPI1P43587 155 aa3.69□□□□□ -1.82
PSE1YMR308C YLR194CQ05777 254 aa3.69□□□□□ -1.82
PSE1YMR308C DCV1P43595 202 aa3.69□□□□□ -1.82
PSE1YMR308C RTC6O14464 93 aa3.68□□□□□ -1.82
PSE1YMR308C YHR022CP38763 256 aa3.68□□□□□ -1.82
PSE1YMR308C YGR269WP40326 108 aa3.68□□□□□ -1.82
PSE1YMR308C YOR032W-AQ8TGS1 66 aa3.68□□□□□ -1.82
PSE1YMR308C YMR007WQ03675 126 aa3.68□□□□□ -1.82
PSE1YMR308C SRX1P36077 127 aa3.67□□□□□ -1.82
PSE1YMR308C YKL065W-AQ2V2P2 73 aa3.67□□□□□ -1.82
PSE1YMR308C RPL36BO14455 100 aaKnown RBP3.67□□□□□ -1.82
PSE1YMR308C RPL36AP05745 100 aaPredicted RBP3.67□□□□□ -1.82
PSE1YMR308C HMRA2P0CY13 119 aa3.67□□□□□ -1.82
PSE1YMR308C YCR022CP25620 114 aa3.67□□□□□ -1.82
PSE1YMR308C ARC15P40518 154 aaRIP-Chip data3.67□□□□□ -1.82not detected
PSE1YMR308C ATP19P81451 68 aa3.67□□□□□ -1.82
PSE1YMR308C YER078W-AQ3E7A2 54 aa3.67□□□□□ -1.82
PSE1YMR308C COX9P07255 59 aa3.66□□□□□ -1.82
PSE1YMR308C HUA1P40325 198 aa3.66□□□□□ -1.82
PSE1YMR308C REE1P40893 198 aa3.66□□□□□ -1.82
PSE1YMR308C NOP10Q6Q547 58 aaPredicted RBP3.66□□□□□ -1.82
PSE1YMR308C YOR034C-AQ3E735 80 aa3.65□□□□□ -1.83
PSE1YMR308C YNL208WP40159 199 aaKnown RBP3.64□□□□□ -1.83
PSE1YMR308C YCR095W-AQ3E787 52 aa3.64□□□□□ -1.83
PSE1YMR308C FIG2P25653 1609 aa3.64□□□□□ -1.83
PSE1YMR308C HSP150P32478 413 aa3.64□□□□□ -1.83
PSE1YMR308C IRC21Q04772 201 aa3.64□□□□□ -1.83
PSE1YMR308C COX14P39103 70 aa3.64□□□□□ -1.83
PSE1YMR308C YDR010CQ12426 110 aa3.64□□□□□ -1.83
PSE1YMR308C RPS30AP0CX33 63 aaKnown RBP3.63□□□□□ -1.83
PSE1YMR308C RPS30BP0CX34 63 aaKnown RBP3.63□□□□□ -1.83
PSE1YMR308C KRE9P39005 276 aa3.63□□□□□ -1.83
PSE1YMR308C BRR2P32639 2163 aaKnown RBP3.62□□□□□ -1.83
PSE1YMR308C YMR244WQ04018 355 aa3.62□□□□□ -1.83
PSE1YMR308C YJL197C-AP0C5P0 93 aa3.62□□□□□ -1.83
PSE1YMR308C PAU7P39545 55 aa3.62□□□□□ -1.83
PSE1YMR308C IGD1P43598 195 aa3.62□□□□□ -1.83
PSE1YMR308C YOL029CQ08187 201 aa3.62□□□□□ -1.83
PSE1YMR308C API2Q04413 109 aa3.61□□□□□ -1.83
PSE1YMR308C POR2P40478 281 aa3.61□□□□□ -1.83
PSE1YMR308C YNL190WP53872 204 aa3.61□□□□□ -1.83
PSE1YMR308C YOL166W-AQ8TGJ1 51 aa3.61□□□□□ -1.83
PSE1YMR308C FAS1P07149 2051 aaKnown RBP3.6□□□□□ -1.83
PSE1YMR308C FPR1P20081 114 aaKnown RBP3.6□□□□□ -1.83
PSE1YMR308C YHL037CP38733 133 aa3.6□□□□□ -1.83
PSE1YMR308C ECM19Q06011 112 aa3.6□□□□□ -1.83
PSE1YMR308C YPR013CQ12145 317 aa3.59□□□□□ -1.83
PSE1YMR308C GLT1Q12680 2145 aaKnown RBP3.59□□□□□ -1.83
PSE1YMR308C QCR8P08525 94 aa3.59□□□□□ -1.83
PSE1YMR308C MRX7P53869 86 aa3.59□□□□□ -1.83
PSE1YMR308C CMC4Q3E7A9 73 aa3.59□□□□□ -1.84
PSE1YMR308C YKR032WP36127 104 aa3.58□□□□□ -1.84
PSE1YMR308C SNA2P56508 79 aa3.58□□□□□ -1.84
PSE1YMR308C FIT2Q08906 153 aa3.58□□□□□ -1.84
PSE1YMR308C YJR085CP47131 105 aaKnown RBP3.58□□□□□ -1.84
PSE1YMR308C YHR125WP38831 101 aa3.57□□□□□ -1.84
PSE1YMR308C PRM7Q12459 698 aa3.57□□□□□ -1.84
PSE1YMR308C YLR111WQ12528 110 aa3.57□□□□□ -1.84
PSE1YMR308C YDR182W-AQ3E796 67 aa3.56□□□□□ -1.84
PSE1YMR308C TMC1Q08422 150 aaPredicted RBP3.56□□□□□ -1.84
PSE1YMR308C YNL042W-BQ3E7Z2 85 aa3.56□□□□□ -1.84
PSE1YMR308C TOM7P53507 60 aa3.54□□□□□ -1.84
PSE1YMR308C YLR236CA0A023PZG4 107 aa3.54□□□□□ -1.84
PSE1YMR308C CCW14O13547 238 aa3.54□□□□□ -1.84
PSE1YMR308C BSC4P53841 131 aa3.53□□□□□ -1.84
PSE1YMR308C RPS11AP0CX47 156 aaKnown RBP3.53□□□□□ -1.84
PSE1YMR308C RPS11BP0CX48 156 aaKnown RBP3.53□□□□□ -1.84
PSE1YMR308C CCW12Q12127 133 aa3.53□□□□□ -1.84
PSE1YMR308C YBR027CP38220 110 aa3.52□□□□□ -1.85
PSE1YMR308C COA3Q3E7B2 85 aa3.52□□□□□ -1.85
PSE1YMR308C SHU1P38751 150 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms