RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W API2Q04413 109 aa3.52□□□□□ -1.85
ABF1YKL112W IRC23Q08416 157 aa3.52□□□□□ -1.85
ABF1YKL112W IRC19Q07843 230 aa3.51□□□□□ -1.85
ABF1YKL112W YOR381W-AQ3E804 55 aa3.51□□□□□ -1.85
ABF1YKL112W PFY1P07274 126 aa3.51□□□□□ -1.85
ABF1YKL112W BRP1P53194 125 aa3.51□□□□□ -1.85
ABF1YKL112W RGM1Q00453 211 aa3.5□□□□□ -1.85
ABF1YKL112W MIX17Q03667 156 aa3.5□□□□□ -1.85
ABF1YKL112W YOL118CQ08259 102 aa3.5□□□□□ -1.85
ABF1YKL112W YOR343CQ12484 108 aa3.49□□□□□ -1.85
ABF1YKL112W YSF3P0C074 85 aaPredicted RBP3.49□□□□□ -1.85
ABF1YKL112W ROX3P25046 220 aa3.49□□□□□ -1.85
ABF1YKL112W MHF2Q3E829 80 aa3.49□□□□□ -1.85
ABF1YKL112W OST5Q92316 86 aa3.49□□□□□ -1.85
ABF1YKL112W YCR022CP25620 114 aa3.48□□□□□ -1.85
ABF1YKL112W YSY6P38374 65 aa3.48□□□□□ -1.85
ABF1YKL112W YHR173CP38864 112 aa3.48□□□□□ -1.85
ABF1YKL112W PTH1P38876 190 aaKnown RBP3.48□□□□□ -1.85
ABF1YKL112W FLO5P38894 1075 aa3.48□□□□□ -1.85
ABF1YKL112W YIR020CP40575 100 aa3.48□□□□□ -1.85
ABF1YKL112W ATP19P81451 68 aa3.48□□□□□ -1.85
ABF1YKL112W YDL241WQ07738 123 aa3.48□□□□□ -1.85
ABF1YKL112W YDR246W-AQ3E763 66 aa3.48□□□□□ -1.85
ABF1YKL112W YAL065CO13511 128 aa3.48□□□□□ -1.85
ABF1YKL112W ARC15P40518 154 aaRIP-Chip data3.48□□□□□ -1.85not detected
ABF1YKL112W PPT2Q12036 173 aa3.48□□□□□ -1.85
ABF1YKL112W YOR314WQ12506 109 aa3.48□□□□□ -1.85
ABF1YKL112W RPS22AP0C0W1 130 aaKnown RBP3.47□□□□□ -1.85
ABF1YKL112W YBL059WP34224 193 aa3.47□□□□□ -1.85
ABF1YKL112W TMC1Q08422 150 aaPredicted RBP3.46□□□□□ -1.85
ABF1YKL112W BSC1Q12140 328 aa3.46□□□□□ -1.85
ABF1YKL112W RPS22BQ3E7Y3 130 aaKnown RBP3.46□□□□□ -1.85
ABF1YKL112W YGR121W-AQ3E816 71 aa3.46□□□□□ -1.85
ABF1YKL112W RPR2P40571 144 aa3.46□□□□□ -1.86
ABF1YKL112W ERI1P62651 68 aaKnown RBP3.46□□□□□ -1.86
ABF1YKL112W YIL014C-AQ02598 104 aa3.46□□□□□ -1.86
ABF1YKL112W YLR146W-AQ2V2P1 62 aa3.46□□□□□ -1.86
ABF1YKL112W YKR073CP36153 106 aa3.45□□□□□ -1.86
ABF1YKL112W DSE2P38844 325 aa3.45□□□□□ -1.86
ABF1YKL112W YNL208WP40159 199 aaKnown RBP3.45□□□□□ -1.86
ABF1YKL112W SED1Q01589 338 aa3.45□□□□□ -1.86
ABF1YKL112W YER188C-AP0C0V2 99 aa3.45□□□□□ -1.86
ABF1YKL112W YLR162WQ06235 118 aa3.45□□□□□ -1.86
ABF1YKL112W YBR209WP38311 105 aa3.44□□□□□ -1.86
ABF1YKL112W YFL012WP43580 148 aa3.44□□□□□ -1.86
ABF1YKL112W YML122CQ03207 126 aa3.44□□□□□ -1.86
ABF1YKL112W PAU1P0CE88 120 aa3.44□□□□□ -1.86
ABF1YKL112W PAU14P0CE89 120 aa3.44□□□□□ -1.86
ABF1YKL112W PAU6P0CE90 120 aa3.44□□□□□ -1.86
ABF1YKL112W PAU18P0CE91 120 aa3.44□□□□□ -1.86
ABF1YKL112W PAU8P0CE92 120 aa3.44□□□□□ -1.86
ABF1YKL112W PAU11P0CE93 120 aa3.44□□□□□ -1.86
ABF1YKL112W AIM4P38305 123 aaPredicted RBP3.44□□□□□ -1.86
ABF1YKL112W PAU13P38725 120 aa3.44□□□□□ -1.86
ABF1YKL112W SPI1P40092 148 aa3.44□□□□□ -1.86
ABF1YKL112W YFL051CP43552 160 aa3.44□□□□□ -1.86
ABF1YKL112W YGL118CP53132 145 aa3.44□□□□□ -1.86
ABF1YKL112W PAU10Q03050 120 aa3.44□□□□□ -1.86
ABF1YKL112W YMR244WQ04018 355 aa3.44□□□□□ -1.86
ABF1YKL112W YOL029CQ08187 201 aa3.44□□□□□ -1.86
ABF1YKL112W PAU20Q08322 120 aa3.44□□□□□ -1.86
ABF1YKL112W PAU9Q3E770 120 aa3.44□□□□□ -1.86
ABF1YKL112W DCV1P43595 202 aa3.43□□□□□ -1.86
ABF1YKL112W PAU4P53427 120 aa3.43□□□□□ -1.86
ABF1YKL112W YPR053CQ6Q5F3 151 aa3.42□□□□□ -1.86
ABF1YKL112W COX23P38824 151 aa3.42□□□□□ -1.86
ABF1YKL112W YGL149WP53116 101 aa3.42□□□□□ -1.86
ABF1YKL112W YMR122CQ03879 124 aa3.42□□□□□ -1.86
ABF1YKL112W QCR9P22289 66 aa3.41□□□□□ -1.86
ABF1YKL112W REE1P40893 198 aa3.41□□□□□ -1.86
ABF1YKL112W YER078W-AQ3E7A2 54 aa3.41□□□□□ -1.86
ABF1YKL112W RPS23AP0CX29 145 aaKnown RBP3.41□□□□□ -1.86
ABF1YKL112W RPS23BP0CX30 145 aa3.41□□□□□ -1.86
ABF1YKL112W AGA2P32781 87 aa3.41□□□□□ -1.86
ABF1YKL112W YKL065W-AQ2V2P2 73 aa3.41□□□□□ -1.86
ABF1YKL112W RPL36BO14455 100 aaKnown RBP3.4□□□□□ -1.87
ABF1YKL112W RTC6O14464 93 aa3.4□□□□□ -1.87
ABF1YKL112W RPL36AP05745 100 aaPredicted RBP3.4□□□□□ -1.87
ABF1YKL112W YEL067CP39978 195 aa3.4□□□□□ -1.87
ABF1YKL112W YJR085CP47131 105 aaKnown RBP3.4□□□□□ -1.87
ABF1YKL112W YPR153WQ06537 140 aa3.4□□□□□ -1.87
ABF1YKL112W YGR035W-AQ45U48 73 aa3.4□□□□□ -1.87
ABF1YKL112W YJL197C-AP0C5P0 93 aa3.39□□□□□ -1.87
ABF1YKL112W HSP150P32478 413 aa3.39□□□□□ -1.87
ABF1YKL112W MRPL38P35996 138 aaPredicted RBP3.39□□□□□ -1.87
ABF1YKL112W SPC1P46965 94 aa3.39□□□□□ -1.87
ABF1YKL112W YLR194CQ05777 254 aa3.39□□□□□ -1.87
ABF1YKL112W YHR125WP38831 101 aa3.39□□□□□ -1.87
ABF1YKL112W MIG3P39943 394 aa3.39□□□□□ -1.87
ABF1YKL112W YOR192C-CQ3E736 78 aa3.39□□□□□ -1.87
ABF1YKL112W YBL071CP38185 102 aa3.38□□□□□ -1.87
ABF1YKL112W YPI1P43587 155 aa3.38□□□□□ -1.87
ABF1YKL112W RPL26BP53221 127 aaKnown RBP3.38□□□□□ -1.87
ABF1YKL112W CRH1P53301 507 aa3.38□□□□□ -1.87
ABF1YKL112W MPC2P38857 129 aa3.38□□□□□ -1.87
ABF1YKL112W NCE101Q02820 53 aa3.38□□□□□ -1.87
ABF1YKL112W AIM19P40502 157 aa3.37□□□□□ -1.87
ABF1YKL112W YLR122CQ12312 125 aa3.36□□□□□ -1.87
ABF1YKL112W YPR013CQ12145 317 aa3.36□□□□□ -1.87
ABF1YKL112W YKL018C-AQ3E7A7 99 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms