RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	YPR096C	O13587	100 aa		0.85	□□□□□ -2.27
APL1	YJR005W	QCR9	P22289	66 aa		0.85	□□□□□ -2.27
APL1	YJR005W	ROX3	P25046	220 aa		0.85	□□□□□ -2.27
APL1	YJR005W	MRPL27	P36526	146 aa	Predicted RBP	0.85	□□□□□ -2.27
APL1	YJR005W	YHL005C	P38752	130 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YHR180W	P38868	163 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YIL163C	P40448	117 aa		0.85	□□□□□ -2.27
APL1	YJR005W	SPC1	P46965	94 aa		0.85	□□□□□ -2.27
APL1	YJR005W	RPL26B	P53221	127 aa	Known RBP	0.85	□□□□□ -2.27
APL1	YJR005W	ERI1	P62651	68 aa	Known RBP	0.85	□□□□□ -2.27
APL1	YJR005W	MET31	Q03081	177 aa		0.85	□□□□□ -2.27
APL1	YJR005W	MRPS8	Q03799	155 aa		0.85	□□□□□ -2.27
APL1	YJR005W	SOM1	Q05676	74 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YPR011C	Q12251	326 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YOR192C-C	Q3E736	78 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YER188C-A	P0C0V2	99 aa		0.84	□□□□□ -2.27
APL1	YJR005W	RPS23A	P0CX29	145 aa	Known RBP	0.84	□□□□□ -2.27
APL1	YJR005W	RPS23B	P0CX30	145 aa		0.84	□□□□□ -2.27
APL1	YJR005W	HMRA2	P0CY13	119 aa		0.84	□□□□□ -2.27
APL1	YJR005W	ERG2	P32352	222 aa		0.84	□□□□□ -2.27
APL1	YJR005W	MSA2	P36157	363 aa		0.84	□□□□□ -2.27
APL1	YJR005W	YBL071C	P38185	102 aa		0.84	□□□□□ -2.27
APL1	YJR005W	AIM19	P40502	157 aa		0.84	□□□□□ -2.27
APL1	YJR005W	ATP19	P81451	68 aa		0.84	□□□□□ -2.27
APL1	YJR005W	YOR314W	Q12506	109 aa		0.84	□□□□□ -2.27
APL1	YJR005W	YLR285C-A	Q3E771	56 aa		0.84	□□□□□ -2.27
APL1	YJR005W	YAL065C	O13511	128 aa		0.83	□□□□□ -2.28
APL1	YJR005W	COX23	P38824	151 aa		0.83	□□□□□ -2.28
APL1	YJR005W	CTR2	P38865	189 aa		0.83	□□□□□ -2.28
APL1	YJR005W	COX14	P39103	70 aa		0.83	□□□□□ -2.28
APL1	YJR005W	ARC15	P40518	154 aa	RIP-Chip data	0.83	□□□□□ -2.28	not detected
APL1	YJR005W	DCV1	P43595	202 aa		0.83	□□□□□ -2.28
APL1	YJR005W	RGM1	Q00453	211 aa		0.83	□□□□□ -2.28
APL1	YJR005W	SED1	Q01589	338 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YMR122C	Q03879	124 aa		0.83	□□□□□ -2.28
APL1	YJR005W	IRC21	Q04772	201 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YLR194C	Q05777	254 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YLR162W	Q06235	118 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YPR153W	Q06537	140 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YDL241W	Q07738	123 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YPL278C	Q08990	100 aa		0.83	□□□□□ -2.28
APL1	YJR005W	VPS68	Q12016	184 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YCR095W-A	Q3E787	52 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YGR121W-A	Q3E816	71 aa		0.83	□□□□□ -2.28
APL1	YJR005W	COA2	Q3E823	68 aa		0.83	□□□□□ -2.28
APL1	YJR005W	RPL36B	O14455	100 aa	Known RBP	0.83	□□□□□ -2.28
APL1	YJR005W	RPL36A	P05745	100 aa	Predicted RBP	0.83	□□□□□ -2.28
APL1	YJR005W	CDC39	P25655	2108 aa	Known RBP	0.83	□□□□□ -2.28
APL1	YJR005W	SRX1	P36077	127 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YHR022C	P38763	256 aa		0.83	□□□□□ -2.28
APL1	YJR005W	MPC2	P38857	129 aa		0.83	□□□□□ -2.28
APL1	YJR005W	PAU7	P39545	55 aa		0.83	□□□□□ -2.28
APL1	YJR005W	SPI1	P40092	148 aa		0.83	□□□□□ -2.28
APL1	YJR005W	EDC1	P53080	175 aa	Predicted RBP	0.83	□□□□□ -2.28
APL1	YJR005W	SNA2	P56508	79 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YMR007W	Q03675	126 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YKL065W-A	Q2V2P2	73 aa		0.83	□□□□□ -2.28
APL1	YJR005W	YDR246W-A	Q3E763	66 aa		0.83	□□□□□ -2.28
APL1	YJR005W	COX9	P07255	59 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YEL067C	P39978	195 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YIR020C	P40575	100 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YNR077C	P53758	84 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YDR010C	Q12426	110 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YIL156W-B	Q2V2P4	73 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YGR035W-A	Q45U48	73 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YOR032W-A	Q8TGS1	66 aa		0.82	□□□□□ -2.28
APL1	YJR005W	RPS30A	P0CX33	63 aa	Known RBP	0.82	□□□□□ -2.28
APL1	YJR005W	RPS30B	P0CX34	63 aa	Known RBP	0.82	□□□□□ -2.28
APL1	YJR005W	BPH1	P25356	2167 aa		0.82	□□□□□ -2.28
APL1	YJR005W	HUA1	P40325	198 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YGR269W	P40326	108 aa		0.82	□□□□□ -2.28
APL1	YJR005W	YOR034C-A	Q3E735	80 aa		0.82	□□□□□ -2.28
APL1	YJR005W	RTC6	O14464	93 aa		0.81	□□□□□ -2.28
APL1	YJR005W	QCR8	P08525	94 aa		0.81	□□□□□ -2.28
APL1	YJR005W	HSP150	P32478	413 aa		0.81	□□□□□ -2.28
APL1	YJR005W	MRPL38	P35996	138 aa	Predicted RBP	0.81	□□□□□ -2.28
APL1	YJR005W	YHR125W	P38831	101 aa		0.81	□□□□□ -2.28
APL1	YJR005W	POR2	P40478	281 aa		0.81	□□□□□ -2.28
APL1	YJR005W	YNL190W	P53872	204 aa		0.81	□□□□□ -2.28
APL1	YJR005W	YOL029C	Q08187	201 aa		0.81	□□□□□ -2.28
APL1	YJR005W	NOP10	Q6Q547	58 aa	Predicted RBP	0.81	□□□□□ -2.28
APL1	YJR005W	YDL022C-A	P0C5L6	82 aa		0.8	□□□□□ -2.28
APL1	YJR005W	YNL208W	P40159	199 aa	Known RBP	0.8	□□□□□ -2.28
APL1	YJR005W	IGD1	P43598	195 aa		0.8	□□□□□ -2.28
APL1	YJR005W	RPL38	P49167	78 aa	Known RBP	0.8	□□□□□ -2.28
APL1	YJR005W	TOM7	P53507	60 aa		0.8	□□□□□ -2.28
APL1	YJR005W	ECM19	Q06011	112 aa		0.8	□□□□□ -2.28
APL1	YJR005W	CCW12	Q12127	133 aa		0.8	□□□□□ -2.28
APL1	YJR005W	YDR182W-A	Q3E796	67 aa		0.8	□□□□□ -2.28
APL1	YJR005W	FLO9	P39712	1322 aa		0.8	□□□□□ -2.28
APL1	YJR005W	BRR2	P32639	2163 aa	Known RBP	0.8	□□□□□ -2.28
APL1	YJR005W	YLR236C	A0A023PZG4	107 aa		0.8	□□□□□ -2.28
APL1	YJR005W	YHL037C	P38733	133 aa		0.8	□□□□□ -2.28
APL1	YJR005W	YIL102C	P40488	101 aa		0.8	□□□□□ -2.28
APL1	YJR005W	BSC4	P53841	131 aa		0.8	□□□□□ -2.28
APL1	YJR005W	MRX7	P53869	86 aa		0.8	□□□□□ -2.28
APL1	YJR005W	API2	Q04413	109 aa		0.8	□□□□□ -2.28
APL1	YJR005W	FAS1	P07149	2051 aa	Known RBP	0.79	□□□□□ -2.28
APL1	YJR005W	CCW14	O13547	238 aa		0.79	□□□□□ -2.28
APL1	YJR005W	YJL197C-A	P0C5P0	93 aa		0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms