RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 NAA35Q5VZE5 725 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 ZNF280DQ6N043 979 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 FAM171BQ6P995 826 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 TMEM184AQ6ZMB5 413 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 MON1BQ7L1V2 547 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 PASD1Q8IV76 773 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 C12orf29Q8N999 325 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 ATRIPQ8WXE1 791 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 CTNNBL1Q8WYA6 563 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 RFFLQ8WZ73 363 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 TCF25Q9BQ70 676 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 GPR62Q9BZJ7 368 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 CRTAC1Q9NQ79 661 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 AVENQ9NQS1 362 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 AAASQ9NRG9 546 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 MYO1AQ9UBC5 1043 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 STK39Q9UEW8 545 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 GTF3C4Q9UKN8 822 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 SORCS3Q9UPU3 1222 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 OR6C75A6NL08 312 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 TMCO5BA8MYB1 307 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 H7C4K7 107 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 TUBB4AP04350 444 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 CALB1P05937 261 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 MMP8P22894 467 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 ACAT1P24752 427 aaKnown RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 GPD2P43304 727 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 GSCP56915 257 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 BST2Q10589 180 aaKnown RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 PTP4A2Q12974 167 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 MTMR3Q13615 1198 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 MDH1BQ5I0G3 518 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 FAM171A1Q5VUB5 890 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 ERMP1Q7Z2K6 904 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 TTC30AQ86WT1 665 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 MCOLN2Q8IZK6 566 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 FUKQ8N0W3 1084 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 WDTC1Q8N5D0 677 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 C12orf76Q8N812 135 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 MSANTD4Q8NCY6 345 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 OR10T2Q8NGX3 314 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 MYCBPAPQ8TBZ2 947 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 SLC2A14Q8TDB8 520 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 STK32AQ8WU08 396 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 NKD2Q969F2 451 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 RMDN1Q96DB5 314 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 TMEM169Q96HH4 297 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 CALR3Q96L12 384 aaKnown RBP12.07□□□□□ -0.48
SLIRP-212ENST00000613856 NOX5Q96PH1 765 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 TTPALQ9BTX7 342 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 IRF2BPLQ9H1B7 796 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 LZTFL1Q9NQ48 299 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 CYLDQ9NQC7 956 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 SPG21Q9NZD8 308 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 PCDHB12Q9Y5F1 795 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 HCFC2Q9Y5Z7 792 aa12.07□□□□□ -0.48
SLIRP-212ENST00000613856 NT5C1B-RDH14C9J2C7 533 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 TBC1D4O60343 1298 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 ATP2C2O75185 946 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 KRT37O76014 449 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 MTA2O94776 668 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 SOD2P04179 222 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 CYP1A2P05177 515 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 CCDC130P13994 396 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 RPL34P49207 117 aaKnown RBP12.06□□□□□ -0.48
SLIRP-212ENST00000613856 HADHBP55084 474 aaKnown RBP12.06□□□□□ -0.48
SLIRP-212ENST00000613856 GPC5P78333 572 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 UBE3AQ05086 875 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 PDCLQ13371 301 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 USP41Q3LFD5 358 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-212ENST00000613856 ANKS3Q6ZW76 656 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 FAM35AQ86V20 835 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 RHOT2Q8IXI1 618 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 GPR65Q8IYL9 337 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 DCP1BQ8IZD4 617 aaKnown RBP12.06□□□□□ -0.48
SLIRP-212ENST00000613856 CPA5Q8WXQ8 436 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 PIK3R5Q8WYR1 880 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 SECISBP2LQ93073 1101 aaKnown RBP12.06□□□□□ -0.48
SLIRP-212ENST00000613856 MYLPFQ96A32 169 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 PCED1BQ96HM7 432 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 C11orf70Q9BRQ4 267 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 VN1R3Q9BXE9 311 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 MIS12Q9H081 205 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 ZCWPW1Q9H0M4 648 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 THAP2Q9H0W7 228 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 ENTPD7Q9NQZ7 604 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 CHST7Q9NS84 486 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 ADAM22Q9P0K1 906 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 TRIM10Q9UDY6 481 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms