RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 ACAP3Q96P50 834 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 EXOC7Q9UPT5 735 aa13.36□□□□□ -0.27
PPFIA4-210ENST00000599966 TTLL13PA6NNM8 815 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 TLR3O15455 904 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 FOXD2O60548 495 aaPredicted RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 LPXNO60711 386 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 CSDE1O75534 798 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 FAM155BO75949 473 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 TMCC1O94876 653 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 DLDP09622 509 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 DPEP1P16444 411 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 NELFEP18615 380 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 PDK3Q15120 406 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 CLEC16AQ2KHT3 1053 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 MSS51Q4VC12 460 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 KCNT1Q5JUK3 1230 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 TXNRD3NBQ6F5E7 133 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 ZCCHC23Q6ZST2 131 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 IWS1Q96ST2 819 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 TMEM121Q9BTD3 319 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 RMI1Q9H9A7 625 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 PXMP2Q9NR77 195 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 DDX43Q9NXZ2 648 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 CYB561D2O14569 222 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 WEE2P0C1S8 567 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 PABPC4LP0CB38 370 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 RXRBP28702 533 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 CCR3P51677 355 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 GPX6P59796 221 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 LRRC8BQ6P9F7 803 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 KLHDC10Q6PID8 442 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 ZNF276Q8N554 614 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 PAFAH2Q99487 392 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 PLVAPQ9BX97 442 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 KCND2Q9NZV8 630 aa13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
PPFIA4-210ENST00000599966 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 A0A1B0GTW7 788 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 VILLO15195 856 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 BUD23O43709 281 aaKnown RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 KRT34O76011 436 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 PENKP01210 267 aaPredicted RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 CYP1A2P05177 515 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 C6orf222P0C671 652 aaPredicted RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 MSX2P35548 267 aaPredicted RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 PRKCEQ02156 737 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 BBS9Q3SYG4 887 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 RABGAP1LQ5R372 815 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 TTLL6Q8N841 843 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 TTC25Q96NG3 672 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 TBC1D22BQ9NU19 505 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 DOLKQ9UPQ8 538 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 MAP3K6O95382 1288 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 GZMAP12544 262 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 CRABP2P29373 138 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 GNA15P30679 374 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 NADK2Q4G0N4 442 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 PPP6R3Q5H9R7 873 aaPredicted RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 TDRD10Q5VZ19 366 aaKnown RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 STYK1Q6J9G0 422 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 DPY19L2Q6NUT2 758 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 ZBTB46Q86UZ6 589 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 ZCCHC9Q8N567 271 aaKnown RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 EBF4Q9BQW3 602 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 SIKE1Q9BRV8 207 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 SLC13A1Q9BZW2 595 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 RPL26L1Q9UNX3 145 aaKnown RBP13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 UBE4BO95155 1302 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 F8VP50 259 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 SGK1O00141 431 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 TFPTP0C1Z6 253 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 CDK4P11802 303 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 NFIL3Q16649 462 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 ANKRD22Q5VYY1 191 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 MIPOL1Q8TD10 442 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 SERAC1Q96JX3 654 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 CNBD2Q96M20 576 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 XPNPEP1Q9NQW7 623 aa13.34□□□□□ -0.27
PPFIA4-210ENST00000599966 C15orf38-AP3S2A0A0A6YYH1 394 aa13.33□□□□□ -0.28
PPFIA4-210ENST00000599966 SPECC1L-ADORA2AF8WAN1 911 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms