RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-214ENST00000580073 ADH1CP00326 375 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 FAM163BP0C2L3 166 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 EIF2DP41214 584 aaKnown RBP14.25□□□□□ -0.13
TRAF4-214ENST00000580073 PI4KAP42356 2102 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 NOP14P78316 857 aaKnown RBP14.25□□□□□ -0.13
TRAF4-214ENST00000580073 MRPS21P82921 87 aaKnown RBP14.25□□□□□ -0.13
TRAF4-214ENST00000580073 OSTM1Q86WC4 334 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 PDZD8Q8NEN9 1154 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 ERCC4Q92889 916 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-214ENST00000580073 CNOT6LQ96LI5 555 aaKnown RBP14.25□□□□□ -0.13
TRAF4-214ENST00000580073 TTLL2Q9BWV7 592 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 HSPBP1Q9NZL4 362 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 USP25Q9UHP3 1055 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 MMP17Q9ULZ9 603 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 EPG5Q9HCE0 2579 aa14.25□□□□□ -0.13
TRAF4-214ENST00000580073 MYO18AQ92614 2054 aaKnown RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 C2orf78A6NCI8 922 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 GOLGA6L4A6NEF3 574 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 CAVIN2O95810 425 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 TNNI1P19237 187 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 TRIM21P19474 475 aaKnown RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 BDNFP23560 247 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 PMLP29590 882 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 HOXD13P35453 343 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 WNT7BP56706 349 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 PSMC1P62191 440 aaKnown RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 ASIC1P78348 528 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 SLC7A9P82251 487 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 DPYDQ12882 1025 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 BYSLQ13895 437 aaKnown RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 TDRD10Q5VZ19 366 aaKnown RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 PMS2CLQ68D20 193 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 NUDT18Q6ZVK8 323 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 UNC13DQ70J99 1090 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 HS2ST1Q7LGA3 356 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 CYP2U1Q7Z449 544 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 CEP57L1Q8IYX8 460 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 RIN3Q8TB24 985 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 MYCBPAPQ8TBZ2 947 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 KBTBD7Q8WVZ9 684 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 C8orf48Q96LL4 319 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 LSM14BQ9BX40 385 aaKnown RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 DUSP15Q9H1R2 295 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 TBC1D14Q9P2M4 693 aa14.24□□□□□ -0.13
TRAF4-214ENST00000580073 CGNQ9P2M7 1197 aaKnown RBP14.24□□□□□ -0.13
TRAF4-214ENST00000580073 ABCA7Q8IZY2 2146 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 BCLAF3A2AJT9 711 aaKnown RBP14.23□□□□□ -0.13
TRAF4-214ENST00000580073 LEFTY2O00292 366 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 KHNYNO15037 678 aaKnown RBP14.23□□□□□ -0.13
TRAF4-214ENST00000580073 TACC1O75410 805 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 CLSTN1O94985 981 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 RTN3O95197 1032 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-214ENST00000580073 APODP05090 189 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 UBE2HP62256 183 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 PNOCQ13519 176 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 CCDC6Q16204 474 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 SNRNP35Q16560 246 aaKnown RBP14.23□□□□□ -0.13
TRAF4-214ENST00000580073 KMT5BQ4FZB7 885 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 TRMT11Q7Z4G4 463 aaKnown RBP14.23□□□□□ -0.13
TRAF4-214ENST00000580073 LIMS2Q7Z4I7 341 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 USP33Q8TEY7 942 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 WHAMMQ8TF30 809 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 OVCA2Q8WZ82 227 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 SYAP1Q96A49 352 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-214ENST00000580073 OTUB2Q96DC9 234 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 PCED1BQ96HM7 432 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 SLC22A12Q96S37 553 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 CYP2S1Q96SQ9 504 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 CGRRF1Q99675 332 aa14.23□□□□□ -0.13
TRAF4-214ENST00000580073 POLMQ9NP87 494 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-214ENST00000580073 TM4SF5O14894 197 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 DLATP10515 647 aaKnown RBP14.22□□□□□ -0.13
TRAF4-214ENST00000580073 ATICP31939 592 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 GNL1P36915 607 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-214ENST00000580073 TRPC3Q13507 836 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 MDH1BQ5I0G3 518 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 EOGTQ5NDL2 527 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 FAM26FQ5R3K3 315 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 ANO7Q6IWH7 933 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 EPM2AIP1Q7L775 607 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-214ENST00000580073 TRAPPC11Q7Z392 1133 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 RASSF3Q86WH2 238 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 CBWD2Q8IUF1 395 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 ZSWIM2Q8NEG5 633 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 OR5B17Q8NGF7 314 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 OR6B3Q8NGW1 331 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 FBRSL1Q9HCM7 1045 aaKnown RBP14.22□□□□□ -0.13
TRAF4-214ENST00000580073 TMEM9BQ9NQ34 198 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 CRTAC1Q9NQ79 661 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 CPQQ9Y646 472 aa14.22□□□□□ -0.13
TRAF4-214ENST00000580073 PVALEFA0A1B0GWK0 134 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 ZNF840PA6NDX5 716 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 F8VP50 259 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 KRT37O76014 449 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 KCNK5O95279 499 aa14.21□□□□□ -0.13
TRAF4-214ENST00000580073 STAU1O95793 577 aaKnown RBP14.21□□□□□ -0.13
TRAF4-214ENST00000580073 OLFM2O95897 454 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms