RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 KIAA1468Q9P260 1216 aa17.07■□□□□ 0.32
VAPA-204ENST00000577901 SPTBN2O15020 2390 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 BIN1O00499 593 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 GABRDO14764 452 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 RNF40O75150 1001 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 EPN2O95208 641 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 ZNF806P0C7X5 589 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 RAP1GAPP47736 663 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 LIMK1P53667 647 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
VAPA-204ENST00000577901 PDGFRLQ15198 375 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 DDR2Q16832 855 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 SGSM1Q2NKQ1 1148 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 ZACNQ401N2 412 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 SDHAF4Q5VUM1 108 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 SV2AQ7L0J3 742 aa17.06■□□□□ 0.32
VAPA-204ENST00000577901 FBRSL1Q9HCM7 1045 aaKnown RBP17.06■□□□□ 0.32
VAPA-204ENST00000577901 UXTQ9UBK9 157 aaPredicted RBP17.06■□□□□ 0.32
VAPA-204ENST00000577901 NXF1Q9UBU9 619 aaKnown RBP17.06■□□□□ 0.32
VAPA-204ENST00000577901 BICDL2A1A5D9 508 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 HAX1O00165 279 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 STX10O60499 249 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 NOL4O94818 638 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 P4HA1P13674 534 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 DRD1P21728 446 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
VAPA-204ENST00000577901 ACAT1P24752 427 aaKnown RBP17.05■□□□□ 0.32
VAPA-204ENST00000577901 CYP2F1P24903 491 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 GTF2H1P32780 548 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 GALK1P51570 392 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
VAPA-204ENST00000577901 RPL10AP62906 217 aaKnown RBP17.05■□□□□ 0.32
VAPA-204ENST00000577901 MTF1Q14872 753 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 ST3GAL2Q16842 350 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 ZNF699Q32M78 642 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 ZNF667Q5HYK9 610 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 INTS6LQ5JSJ4 861 aaKnown RBP17.05■□□□□ 0.32
VAPA-204ENST00000577901 KLHL10Q6JEL2 608 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 CAMKK1Q8N5S9 505 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 TAF4BQ92750 862 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 EEF2KMTQ96G04 330 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 P2RY13Q9BPV8 354 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 XYLT2Q9H1B5 865 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 SNX25Q9H3E2 840 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 VRTNQ9H8Y1 702 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 ABCB6Q9NP58 842 aa17.05■□□□□ 0.32
VAPA-204ENST00000577901 POLR3BQ9NW08 1133 aaPredicted RBP17.05■□□□□ 0.32
VAPA-204ENST00000577901 ACACBO00763 2458 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 PPP1R3GB7ZBB8 358 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 SLC16A3O15427 465 aaKnown RBP17.04■□□□□ 0.32
VAPA-204ENST00000577901 TACC1O75410 805 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 TADA3O75528 432 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
VAPA-204ENST00000577901 BMP6P22004 513 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 GJA4P35212 333 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 GNL1P36915 607 aaPredicted RBP17.04■□□□□ 0.32
VAPA-204ENST00000577901 GCLMP48507 274 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 C1orf220Q5T0J3 134 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 NAIF1Q69YI7 327 aaPredicted RBP17.04■□□□□ 0.32
VAPA-204ENST00000577901 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 CPA6Q8N4T0 437 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 OR6B3Q8NGW1 331 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 KBTBD7Q8WVZ9 684 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 TRMT2BQ96GJ1 504 aaKnown RBP17.04■□□□□ 0.32
VAPA-204ENST00000577901 HHIPQ96QV1 700 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 PKMYT1Q99640 499 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 ECT2Q9H8V3 914 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 TRPC7Q9HCX4 862 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 RXFP3Q9NSD7 469 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
VAPA-204ENST00000577901 GTF3C4Q9UKN8 822 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 CDH9Q9ULB4 789 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 PCDHGA5Q9Y5G8 931 aa17.04■□□□□ 0.32
VAPA-204ENST00000577901 LAMA1P25391 3075 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 TRAV19A0A0A6YYK7 116 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 TRIM49BA6NDI0 452 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 VNN1O95497 513 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 PDGFRBP09619 1106 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 TRIM49P0CI25 452 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 TRIM49CP0CI26 452 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 PIK3CAP42336 1068 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 MCCD1P59942 119 aaPredicted RBP17.03■□□□□ 0.32
VAPA-204ENST00000577901 MAPRE1Q15691 268 aaKnown RBP17.03■□□□□ 0.32
VAPA-204ENST00000577901 FBXO43Q4G163 708 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 PLA2G2CQ5R387 149 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 KRT39Q6A163 491 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 FOXR2Q6PJQ5 311 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 ZC3H3Q8IXZ2 948 aaKnown RBP17.03■□□□□ 0.32
VAPA-204ENST00000577901 CCDC150Q8NCX0 1101 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 RPLP0P6Q8NHW5 317 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 ZC3H10Q96K80 434 aaKnown RBP17.03■□□□□ 0.32
VAPA-204ENST00000577901 MYRFLQ96LU7 910 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 CEP63Q96MT8 703 aa17.03■□□□□ 0.32
VAPA-204ENST00000577901 CYP2S1Q96SQ9 504 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms