RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 FBXO18Q8NFZ0 1043 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 FAM124BQ9H5Z6 455 aaPredicted RBP17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 AGO2Q9UKV8 859 aaKnown RBP17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 KIAA1549LQ6ZVL6 1849 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 ACACAQ13085 2346 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 LAD1O00515 517 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 TRAK2O60296 914 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 NDUFS2O75306 463 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 HOXB2P14652 356 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 GNSP15586 552 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 MAOBP27338 520 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 GRIK1P39086 918 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 USP46P62068 366 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 SLC7A9P82251 487 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 TFAMQ00059 246 aaKnown RBP17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 HYIQ5T013 277 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 SYCP2LQ5T4T6 812 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 TRMT11Q7Z4G4 463 aaKnown RBP17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 OSTM1Q86WC4 334 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 TMEM86AQ8N2M4 240 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 KCNN1Q92952 543 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 FUBP3Q96I24 572 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 CACNA2D2Q9NY47 1150 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 ODF2LQ9ULJ1 636 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 ASXL3Q9C0F0 2248 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 ADAMTS9Q9P2N4 1935 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 PI4KAP42356 2102 aa17.41■□□□□ 0.38
CTDNEP1-211ENST00000575783 ZNF840PA6NDX5 716 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 ATP2C2O75185 946 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 ZNF217O75362 1048 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 ITGB3P05106 788 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 PFKLP17858 780 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 SCP2P22307 547 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 PRPHP41219 470 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 NEK4P51957 841 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 ANAPC15P60006 121 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 GRIK2Q13002 908 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 LY6G5CQ5SRR4 150 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 BTBD8Q5XKL5 378 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 DENND5BQ6ZUT9 1274 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 TMPRSS7Q7RTY8 843 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 GPBP1Q86WP2 473 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 PARVGQ9HBI0 331 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 MAGEC2Q9UBF1 373 aaPredicted RBP17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 SUSD2Q9UGT4 822 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 PCOLCE2Q9UKZ9 415 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 SNX9Q9Y5X1 595 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 DENND4CQ5VZ89 1909 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 SCN1AP35498 2009 aa17.4■□□□□ 0.38
CTDNEP1-211ENST00000575783 TRABD2BA6NFA1 517 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 GOLGA8CPA6NN73 597 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 CBFA2T3O75081 653 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 PLCG1P19174 1290 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 BDNFP23560 247 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 PCSK1P29120 753 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 NTSR1P30989 418 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 MAGEA11P43364 429 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 LHX1P48742 406 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 GAD2Q05329 585 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 C10orf76Q5T2E6 689 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 SCARA3Q6AZY7 606 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 CRELD2Q6UXH1 353 aaPredicted RBP17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 C4orf50Q6ZRC1 276 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 GLRX5Q86SX6 157 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 ADGRF2Q8IZF7 708 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 PHTF2Q8N3S3 785 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 KCTD17Q8N5Z5 321 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 CSGALNACT2Q8N6G5 542 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 ZNF419Q96HQ0 510 aaPredicted RBP17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 SPATA17Q96L03 361 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 IKZF4Q9H2S9 585 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 KIAA1522Q9P206 1035 aaPredicted RBP17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 DEC1Q9P2X7 70 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 TNRC6BQ9UPQ9 1833 aaKnown RBP17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 MAST4O15021 2626 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 PTPRDP23468 1912 aa17.39■□□□□ 0.37
CTDNEP1-211ENST00000575783 OBSL1O75147 1896 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 ANK1P16157 1881 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 A0A1W2PQF6 199 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 IL18RAPO95256 599 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 KRT19P08727 400 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 MBL2P11226 248 aaPredicted RBP17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 NDUFV2P19404 249 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 ANXA13P27216 316 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 PSMC1P62191 440 aaKnown RBP17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 GTF2BQ00403 316 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 WDR45BQ5MNZ6 344 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 SDE2Q6IQ49 451 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 FAM171BQ6P995 826 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 NUDT18Q6ZVK8 323 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 MIB1Q86YT6 1006 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 C1orf127Q8N9H9 656 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 KCNV2Q8TDN2 545 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 POMGNT1Q8WZA1 660 aa17.38■□□□□ 0.37
CTDNEP1-211ENST00000575783 DCBLD2Q96PD2 775 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms