RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 YARSP54577 528 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SEPT7Q16181 437 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 RNASEH2BQ5TBB1 312 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SPATA21Q7Z572 469 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 FUKQ8N0W3 1084 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 CCDC63Q8NA47 563 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 FBXO36Q8NEA4 188 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 CKAP2Q8WWK9 683 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SCYL1Q96KG9 808 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SMC6Q96SB8 1091 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 B3GNT5Q9BYG0 378 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 PRMT7Q9NVM4 692 aaPredicted RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 XPO7Q9UIA9 1087 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 PCDHGC3Q9UN70 934 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 CLEC11AQ9Y240 323 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 ZNFX1Q9P2E3 1918 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 FAM47DPA6NHR8 397 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 PDGFRBP09619 1106 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 KRT4P19013 534 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 GCAP28676 217 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 ADORA2AP29274 412 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 TRPC1P48995 793 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 WDR4P57081 412 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 KRT81Q14533 505 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 ILDR2Q71H61 639 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 CPT1BQ92523 772 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 RMDN2Q96LZ7 410 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 PEBP4Q96S96 227 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 MAGEB5Q9BZ81 275 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SETD4Q9NVD3 440 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 DPP3Q9NY33 737 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 GGA2Q9UJY4 613 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 NR2E3Q9Y5X4 410 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 POLR2AP24928 1970 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SYNJ2BP-COX16A0A087WUM0 186 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 C3orf70A6NLC5 250 aaPredicted RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 MCF2LO15068 1137 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 GAS2O43903 313 aaKnown RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 CILPO75339 1184 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 GPD2P43304 727 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 IL9RQ01113 521 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 TAP1Q03518 808 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 MORF4L2Q15014 288 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 LRRC38Q5VT99 294 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 PPP1R2P3Q6NXS1 205 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 FAM183BPQ6ZVS7 135 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 DPP9Q86TI2 863 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 FBF1Q8TES7 1133 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 PRCCQ92733 491 aaPredicted RBP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 ACAP3Q96P50 834 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SGIP1Q9BQI5 828 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 SNTG2Q9NY99 539 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC00558-201ENST00000569422 COX16Q9P0S2 106 aa9.16□□□□□ -0.94
LINC00558-201ENST00000569422 ATXN2Q99700 1313 aaKnown RBP9.15□□□□□ -0.94
LINC00558-201ENST00000569422 H3BRB1 525 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 CXCL11O14625 94 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 TMEM63AO94886 807 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 IL18RAPO95256 599 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 NPTXRO95502 500 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 ITGAVP06756 1048 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 ATXN1P54253 815 aaKnown RBP9.15□□□□□ -0.94
LINC00558-201ENST00000569422 GPX6P59796 221 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 YWHAGP61981 247 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINC00558-201ENST00000569422 KCNJ2P63252 427 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 ARHGAP1Q07960 439 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 GRM1Q13255 1194 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 GOLGA7BQ2TAP0 167 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
LINC00558-201ENST00000569422 HHATQ5VTY9 493 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 IQCF2Q8IXL9 164 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 OR6B3Q8NGW1 331 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 SLC35B2Q8TB61 432 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 CCHCR1Q8TD31 782 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 MAML1Q92585 1016 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 SLC10A4Q96EP9 437 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 MUC3BQ9H195 1237 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 TUT1Q9H6E5 874 aaKnown RBP9.15□□□□□ -0.94
LINC00558-201ENST00000569422 ECT2Q9H8V3 914 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 PCDH9Q9HC56 1237 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 KLK14Q9P0G3 267 aa9.15□□□□□ -0.94
LINC00558-201ENST00000569422 PRPSAP2O60256 369 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 CYP3A5P20815 502 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 AKAP5P24588 427 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 GJA5P36382 358 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 ARL4CP56559 192 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 COPS2P61201 443 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 SLC1A5Q15758 541 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 PRAMEF19Q5SWL8 479 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 C9orf131Q5VYM1 1079 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 TRNP1Q6NT89 227 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 TRABD2AQ86V40 505 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 CTAGE3PQ8IX95 158 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 PARP9Q8IXQ6 854 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 FITM2Q8N6M3 262 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 P3H4Q92791 437 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 C18orf25Q96B23 403 aaPredicted RBP9.15□□□□□ -0.95
LINC00558-201ENST00000569422 CFAP36Q96G28 342 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms