RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 RBM17Q96I25 401 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 TEPSINQ96N21 525 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 UIMC1Q96RL1 719 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 LBHD1Q9BQE6 289 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 TACO1Q9BSH4 297 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 G6PC3Q9BUM1 346 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 PACSIN1Q9BY11 444 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 RNF32Q9H0A6 362 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 C11orf54Q9H0W9 315 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 OR10A4Q9H209 315 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 VPS16Q9H269 839 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ADAMTS10Q9H324 1103 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 TP63Q9H3D4 680 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ZNF552Q9H707 407 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 RMI1Q9H9A7 625 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 BRF2Q9HAW0 419 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 BCO1Q9HAY6 547 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 USP40Q9NVE5 1235 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 DTLQ9NZJ0 730 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 PI4KBQ9UBF8 816 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 EBF1Q9UH73 591 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 TRPS1Q9UHF7 1281 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 EIF2B4Q9UI10 523 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 NUDT5Q9UKK9 219 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 ZDHHC8Q9ULC8 765 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 C19orf53Q9UNZ5 99 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 WASF3Q9UPY6 502 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 MYRFQ9Y2G1 1151 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 IRAK3Q9Y616 596 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 PSAT1Q9Y617 370 aa3.66□□□□□ -1.82
HERPUD1-211ENST00000566550 A0A087WWL8 130 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 MYOCOSA0A1B0GUC4 107 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 C17orf113A0A1B0GUU1 675 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 RTCAO00442 366 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 TNPO2O14787 897 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 FYB1O15117 783 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 VILLO15195 856 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 TSPAN3O60637 253 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 COQ9O75208 318 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 GLP2RO95838 553 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 AFPP02771 609 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 TUBB4AP04350 444 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 ENO2P09104 434 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 CNPP09543 421 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM200BP0CF97 657 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 INSRRP14616 1297 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 BTF3P20290 206 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 IL11P20809 199 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 NFKBIAP25963 317 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 MST1P26927 711 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 GCH1P30793 250 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 EIF2DP41214 584 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 KIR2DL1P43626 348 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 KIR2DL2P43627 348 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 PTDSS1P48651 473 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 CPT1AP50416 773 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF135P52742 658 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 BPIFB3P59826 476 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 UBXN2AP68543 259 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 POU6F2P78424 691 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 IL13RA1P78552 427 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 CYP4F8P98187 520 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 RNASELQ05823 741 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 FSTL1Q12841 308 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 STK4Q13043 487 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 GPS1Q13098 491 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 ACVR2BQ13705 512 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 DCTN1Q14203 1278 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 SMC1AQ14683 1233 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 GRM4Q14833 912 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 SKIDA1Q1XH10 827 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC5A9Q2M3M2 681 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 GALNTL6Q49A17 601 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 PRAMEF14Q5SWL7 426 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 PLAG1Q6DJT9 500 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 NAA16Q6N069 864 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 MRNIPQ6NTE8 343 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 USP17L6PQ6QN14 398 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 LIPIQ6XZB0 460 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 BTN2A1Q7KYR7 527 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 KRT74Q7RTS7 529 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 KRT28Q7Z3Y7 464 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 KCTD20Q7Z5Y7 419 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 LMNTD2Q8IXW0 634 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 RPAP2Q8IXW5 612 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 GALNT4Q8N4A0 578 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 ZBTB8BQ8NAP8 495 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 NETO2Q8NC67 525 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 APPL2Q8NEU8 664 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 GOT1L1Q8NHS2 421 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 MDM1Q8TC05 714 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 IGDCC4Q8TDY8 1250 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 CPT1BQ92523 772 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 USP6NLQ92738 828 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 SECISBP2LQ93073 1101 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 JAKMIP2Q96AA8 810 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 TOE1Q96GM8 510 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 PEX11GQ96HA9 241 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 FEM1CQ96JP0 617 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 SIGLEC10Q96LC7 697 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms