RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 LRRC4Q9HBW1 653 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 USP18Q9UMW8 372 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 UTP11Q9Y3A2 253 aaKnown RBP20.52■□□□□ 0.88
CLN6-205ENST00000564846 CEP350Q5VT06 3117 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 BHMG1C9JSJ3 638 aaPredicted RBP20.51■□□□□ 0.87
CLN6-205ENST00000564846 TTI1O43156 1089 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 IL1R2P27930 398 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 MIPP30301 263 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 CCDC14Q49A88 953 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 TXNRD3NBQ6F5E7 133 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 CCDC137Q6PK04 289 aaKnown RBP20.51■□□□□ 0.87
CLN6-205ENST00000564846 HDXQ7Z353 690 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.51■□□□□ 0.874e-7■■■■■ 58.1
CLN6-205ENST00000564846 CASD1Q96PB1 797 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 PPP1R12CQ9BZL4 782 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 TANC1Q9C0D5 1861 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 ZSCAN5CA6NGD5 496 aaPredicted RBP20.51■□□□□ 0.87
CLN6-205ENST00000564846 AP1G2O75843 785 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 BEST1O76090 585 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 TJP3O95049 919 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 MYBL2P10244 700 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 COILP38432 576 aaPredicted RBP20.51■□□□□ 0.87
CLN6-205ENST00000564846 GJA8P48165 433 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 MAP3K7CLP57077 242 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 YWHAHQ04917 246 aaPredicted RBP20.51■□□□□ 0.87
CLN6-205ENST00000564846 CUL1Q13616 776 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 LLGL1Q15334 1064 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 TCTN1Q2MV58 587 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 TFDP3Q5H9I0 405 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 MFSD7Q6UXD7 560 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 SPOCD1Q6ZMY3 1216 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 CRIPAKQ8N1N5 446 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 AENQ8WTP8 325 aaKnown RBP20.51■□□□□ 0.87
CLN6-205ENST00000564846 CASKIN2Q8WXE0 1202 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 SMARCD1Q96GM5 515 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 HERPUD2Q9BSE4 406 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 HEMGNQ9BXL5 484 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 FUT8Q9BYC5 575 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 PLEKHA4Q9H4M7 779 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 ZWILCHQ9H900 591 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 KLHL11Q9NVR0 708 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 RASAL2Q9UJF2 1139 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 TBX21Q9UL17 535 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 EFR3BQ9Y2G0 817 aa20.51■□□□□ 0.87
CLN6-205ENST00000564846 LRRD1A4D1F6 860 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 F8W810 466 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 PI4K2BG5E9Z4 385 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 TRUB2O95900 331 aaKnown RBP20.5■□□□□ 0.87
CLN6-205ENST00000564846 PTPN9P43378 593 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 EPHB4P54760 987 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 TSPY1Q01534 308 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 ADIGQ0VDE8 80 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 EMBQ6PCB8 327 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 NPAS4Q8IUM7 802 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 SIX6OS1Q8N1H7 587 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 DNAJC5GQ8N7S2 189 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 CLEC4CQ8WTT0 213 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 SEC14L1Q92503 715 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 RAPGEF5Q92565 580 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 MYLPFQ96A32 169 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 CFAP57Q96MR6 1250 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 PKMYT1Q99640 499 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 MRPL9Q9BYD2 267 aaKnown RBP20.5■□□□□ 0.87
CLN6-205ENST00000564846 DNAJB4Q9UDY4 337 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 PCSK1NQ9UHG2 260 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 TSC2P49815 1807 aa20.5■□□□□ 0.87
CLN6-205ENST00000564846 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 ESYT3A0FGR9 886 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 HSF2BPO75031 334 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 TADA2AO75478 443 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 FBXO21O94952 628 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 CYP2C18P33260 490 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 CARSP49589 748 aaKnown RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 C15orf59Q2T9L4 293 aaPredicted RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 TTC27Q6P3X3 843 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 ANKS1BQ7Z6G8 1248 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 CMASQ8NFW8 434 aaPredicted RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 DIS3LQ8TF46 1054 aaKnown RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 IFT81Q8WYA0 676 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 SLCO2A1Q92959 643 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 SMOQ99835 787 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 NRDE2Q9H7Z3 1164 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 CSNK1G1Q9HCP0 422 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 FEZ2Q9UHY8 353 aaPredicted RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 ATP11BQ9Y2G3 1177 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 PRG3Q9Y2Y8 225 aaPredicted RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 hCG_1818297A0A087WSY0 165 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 PRPSAP2O60256 369 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 HSPA8P11142 646 aaKnown RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 CDKN2BP42772 138 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 PTGIRP43119 386 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 MRPS5P82675 430 aaKnown RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 CCNG2Q16589 344 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 SMTNL2Q2TAL5 461 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 JAMLQ86YT9 394 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 GSPT2Q8IYD1 628 aaKnown RBP20.49■□□□□ 0.87
CLN6-205ENST00000564846 CCDC105Q8IYK2 499 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 OR10T2Q8NGX3 314 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms